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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051373 through 18771 annotations produced 1 hits



(CG31373):

Annotation Number : CG31373
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051373
Gbrowse : chr3R:6534308-6535056 (-) // 100.0 //
Probeset : 1638417_at
Accessions : protein= NP_731495;, nucleotide= NM_169355;
Interpro : 0005506 // iron ion binding // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from el
FlyMine data for FBgn0051373.
BioGrid reports that CG31373 interacts with CG5271 CG5471 CG8198 .
VDRC has 2 RNAi stocks for FBgn0051373 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.00Down
Head9 ± 20 of 4 0.00Down
Eye2 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion5 ± 10 of 4 0.00Down
Salivary gland25 ± 40 of 4 0.12Down
Crop13 ± 40 of 4 0.10Down
Midgut74 ± 44 of 4 0.30Down
Tubule3983 ± 1074 of 418.20Up
Hindgut52 ± 34 of 4 0.20Down
Heart228 ± 164 of 4 1.04None
Fat body561 ± 624 of 4 2.56Up
Ovary58 ± 24 of 4 0.30Down
Testis9 ± 10 of 4 0.00Down
Male accessory glands11 ± 40 of 4 0.10Down
Virgin spermatheca369 ± 254 of 4 1.68Up
Mated spermatheca362 ± 104 of 4 1.65Up
Adult carcass225 ± 74 of 4 1.00None
Larval CNS13 ± 41 of 4 0.06Down
Larval Salivary gland22 ± 42 of 4 0.10Down
Larval midgut68 ± 14 of 4 0.31Down
Larval tubule2560 ± 1364 of 411.70Up
Larval hindgut38 ± 44 of 4 0.18Down
Larval fat body20 ± 51 of 4 0.10Down
Larval trachea20 ± 23 of 4 0.09Down
Larval carcass33 ± 44 of 4 0.15Down
S2 cells (growing)3 ± 10 of 4 0.01Down
Whole fly219 ± 334 of 4

Looking for FBgn0051373. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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