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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051380 through 18771 annotations produced 1 hits



(CG31380):

Annotation Number : CG31380
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051380
Gbrowse : chr3R:21613832-21615177 (-) // 100.0 //
Probeset : 1626164_at
Accessions : protein= NP_733121;, nucleotide= NM_170242;
FlyMine data for FBgn0051380.
VDRC has 1 RNAi stocks for FBgn0051380 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.10Down
Head19 ± 23 of 4 0.70None
Eye9 ± 10 of 4 0.33Down
Thoracicoabdominal ganglion4 ± 20 of 4 0.20Down
Salivary gland16 ± 40 of 4 0.60None
Crop9 ± 20 of 4 0.30Down
Midgut7 ± 10 of 4 0.30Down
Tubule948 ± 1764 of 434.50Up
Hindgut15 ± 31 of 4 0.60Down
Heart21 ± 33 of 4 0.76None
Fat body40 ± 54 of 4 1.48Up
Ovary1 ± 00 of 4 0.10Down
Testis67 ± 14 of 4 2.40Up
Male accessory glands33 ± 23 of 4 1.20None
Virgin spermatheca49 ± 14 of 4 1.78Up
Mated spermatheca26 ± 12 of 4 0.94None
Adult carcass28 ± 22 of 4 1.00None
Larval CNS4 ± 20 of 4 0.16Down
Larval Salivary gland3 ± 10 of 4 0.13Down
Larval midgut34 ± 60 of 4 1.26None
Larval tubule1017 ± 574 of 437.00Up
Larval hindgut7 ± 00 of 4 0.26Down
Larval fat body48 ± 103 of 4 1.80None
Larval trachea4 ± 30 of 4 0.17Down
Larval carcass3 ± 00 of 4 0.11Down
S2 cells (growing)2 ± 00 of 4 0.10Down
Whole fly27 ± 34 of 4

Looking for FBgn0051380. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime