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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051419 through 18771 annotations produced 1 hits



(CG31419):

Annotation Number : CG31419
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051419
Gbrowse : chr3R:13110631-13111105 (+) // 100.0 //
Probeset : 1636014_at
Accessions : protein= NP_732225;, nucleotide= NM_169754;
FlyMine data for FBgn0051419.
VDRC has 1 RNAi stocks for FBgn0051419 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head3 ± 10 of 4 0.10Down
Eye6 ± 21 of 4 0.12Down
Thoracicoabdominal ganglion3 ± 10 of 4 0.10Down
Salivary gland5 ± 20 of 4 0.11Down
Crop2 ± 10 of 4 0.00Down
Midgut4 ± 10 of 4 0.10Down
Tubule3 ± 00 of 4 0.10Down
Hindgut3 ± 10 of 4 0.10Down
Heart4 ± 10 of 4 0.10Down
Fat body4 ± 40 of 4 0.10Down
Ovary5 ± 00 of 4 0.10Down
Testis4 ± 20 of 4 0.10Down
Male accessory glands4339 ± 964 of 484.60Up
Virgin spermatheca3 ± 10 of 4 0.06Down
Mated spermatheca3 ± 10 of 4 0.07Down
Adult carcass8 ± 20 of 4 0.20Down
Larval CNS3 ± 10 of 4 0.07Down
Larval Salivary gland1 ± 00 of 4 0.04Down
Larval midgut6 ± 10 of 4 0.12Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut2 ± 10 of 4 0.05Down
Larval fat body2 ± 10 of 4 0.10Down
Larval trachea4 ± 20 of 4 0.09Down
Larval carcass1 ± 00 of 4 0.04Down
S2 cells (growing)4 ± 00 of 4 0.08Down
Whole fly51 ± 44 of 4

Looking for FBgn0051419. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime