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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051445 through 18771 annotations produced 1 hits



(CG31445):

Annotation Number : CG31445
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051445
Gbrowse : chr3R:25066300-25070220 (-) // 100.0 //
Probeset : 1633991_at
Accessions : protein= NP_651689;, nucleotide= NM_143432;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity
Interpro : 0004177 // aminopeptidase activity // inferred from sequence or structural similarity /// 0004177 // aminopeptidase acti
FlyMine data for FBgn0051445.
BDGP gene expression has embryonic in situ data for CG31445: 2 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0051445 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain19 ± 04 of 4 0.40Down
Head178 ± 34 of 4 3.40Up
Eye105 ± 134 of 4 1.98Up
Thoracicoabdominal ganglion12 ± 13 of 4 0.20Down
Salivary gland56 ± 44 of 4 1.07None
Crop255 ± 64 of 4 4.80Up
Midgut13 ± 30 of 4 0.20Down
Tubule13 ± 30 of 4 0.30Down
Hindgut342 ± 74 of 4 6.50Up
Heart250 ± 174 of 4 4.73Up
Fat body77 ± 124 of 4 1.45Up
Ovary3 ± 10 of 4 0.10Down
Testis231 ± 94 of 4 4.40Up
Male accessory glands233 ± 224 of 4 4.40Up
Virgin spermatheca112 ± 14 of 4 2.11Up
Mated spermatheca97 ± 44 of 4 1.84Up
Adult carcass159 ± 44 of 4 3.00Up
Larval CNS8 ± 23 of 4 0.16Down
Larval Salivary gland8 ± 30 of 4 0.16Down
Larval midgut7 ± 00 of 4 0.13Down
Larval tubule6 ± 20 of 4 0.10Down
Larval hindgut25 ± 34 of 4 0.47Down
Larval fat body46 ± 164 of 4 0.90None
Larval trachea9 ± 02 of 4 0.19Down
Larval carcass13 ± 32 of 4 0.26Down
S2 cells (growing)124 ± 24 of 4 2.35Up
Whole fly53 ± 34 of 4

Looking for FBgn0051445. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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