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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051451 through 18771 annotations produced 1 hits



():

Annotation Number : CG31451
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr3R:19809067-19810287 (+) // 99.59 //
Probeset : 1629152_at
Accessions : protein= , nucleotide=


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4227 ± 1444 of 4 8.60Up
Head2516 ± 3084 of 4 5.10Up
Eye2325 ± 2634 of 4 4.74Up
Thoracicoabdominal ganglion5438 ± 2384 of 411.10Up
Salivary gland24 ± 31 of 4 0.05Down
Crop136 ± 74 of 4 0.30Down
Midgut21 ± 32 of 4 0.00Down
Tubule11 ± 11 of 4 0.00Down
Hindgut48 ± 34 of 4 0.10Down
Heart210 ± 154 of 4 0.43Down
Fat body32 ± 113 of 4 0.07Down
Ovary3 ± 00 of 4 0.00Down
Testis27 ± 14 of 4 0.10Down
Male accessory glands47 ± 54 of 4 0.10Down
Virgin spermatheca35 ± 43 of 4 0.07Down
Mated spermatheca46 ± 83 of 4 0.10Down
Adult carcass220 ± 554 of 4 0.40Down
Larval CNS1201 ± 1854 of 4 2.45Up
Larval Salivary gland18 ± 41 of 4 0.04Down
Larval midgut33 ± 34 of 4 0.07Down
Larval tubule23 ± 14 of 4 0.00Down
Larval hindgut77 ± 74 of 4 0.16Down
Larval fat body5 ± 20 of 4 0.00Down
Larval trachea47 ± 564 of 4 0.10Down
Larval carcass100 ± 34 of 4 0.20Down
S2 cells (growing)26 ± 34 of 4 0.05Down
Whole fly490 ± 414 of 4

Looking for FBgn0051451. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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