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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051510 through 18771 annotations produced 1 hits



(CG31510):

Annotation Number : CG31510
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051510
Gbrowse : chr3R:20943146-20948631 (-) // 100.0 //
Probeset : 1630242_at
Accessions : protein= NP_733082;, nucleotide= NM_170203;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation
FlyMine data for FBgn0051510.
BioGrid reports that CG31510 interacts with CG32096 .
VDRC has 2 RNAi stocks for FBgn0051510 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain81 ± 24 of 4 1.40Up
Head45 ± 54 of 4 0.80None
Eye67 ± 24 of 4 1.21Up
Thoracicoabdominal ganglion60 ± 44 of 4 1.10None
Salivary gland31 ± 14 of 4 0.57Down
Crop36 ± 04 of 4 0.60Down
Midgut31 ± 34 of 4 0.60Down
Tubule25 ± 14 of 4 0.40Down
Hindgut25 ± 14 of 4 0.50Down
Heart26 ± 33 of 4 0.47Down
Fat body32 ± 54 of 4 0.57Down
Ovary143 ± 54 of 4 2.60Up
Testis83 ± 34 of 4 1.50Up
Male accessory glands49 ± 14 of 4 0.90None
Virgin spermatheca32 ± 24 of 4 0.59Down
Mated spermatheca32 ± 24 of 4 0.58Down
Adult carcass29 ± 23 of 4 0.50Down
Larval CNS129 ± 34 of 4 2.31Up
Larval Salivary gland29 ± 24 of 4 0.53Down
Larval midgut28 ± 24 of 4 0.51Down
Larval tubule21 ± 14 of 4 0.40Down
Larval hindgut32 ± 24 of 4 0.58Down
Larval fat body31 ± 74 of 4 0.60Down
Larval trachea55 ± 24 of 4 0.98None
Larval carcass37 ± 14 of 4 0.67Down
S2 cells (growing)58 ± 34 of 4 1.04None
Whole fly56 ± 34 of 4

Looking for FBgn0051510. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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