Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051516 through 18771 annotations produced 1 hits



(CG31516):

Annotation Number : CG31516
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051516
Gbrowse : chr3R:44671-45852 (-) // 100.0 //
Probeset : 1625016_at
Accessions : protein= NP_730784;, nucleotide= NM_164316;
FlyMine data for FBgn0051516.
VDRC has 2 RNAi stocks for FBgn0051516 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.20None
Head1 ± 10 of 4 0.20None
Eye1 ± 00 of 4 0.19None
Thoracicoabdominal ganglion1 ± 00 of 4 0.20None
Salivary gland289 ± 94 of 435.12Up
Crop6 ± 20 of 4 0.80None
Midgut1 ± 00 of 4 0.20None
Tubule10 ± 10 of 4 1.20None
Hindgut1 ± 00 of 4 0.20None
Heart0 ± 00 of 4 0.09None
Fat body1 ± 00 of 4 0.16None
Ovary0 ± 00 of 4 0.10None
Testis103 ± 54 of 412.50Up
Male accessory glands3 ± 20 of 4 0.50None
Virgin spermatheca2 ± 10 of 4 0.33None
Mated spermatheca1 ± 00 of 4 0.15None
Adult carcass3 ± 00 of 4 0.40None
Larval CNS0 ± 00 of 4 0.09None
Larval Salivary gland12 ± 50 of 4 1.52None
Larval midgut1 ± 00 of 4 0.16None
Larval tubule0 ± 00 of 4 0.10None
Larval hindgut1 ± 00 of 4 0.18None
Larval fat body1 ± 00 of 4 0.20None
Larval trachea0 ± 00 of 4 0.11None
Larval carcass0 ± 00 of 4 0.11None
S2 cells (growing)1 ± 00 of 4 0.13None
Whole fly8 ± 20 of 4

Looking for FBgn0051516. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime