Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0051533 through 18771 annotations produced 1 hits


(CG31533):

Annotation Number : CG31533
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051533
Gbrowse : chr3R:9980478-9983013 (-) // 100.0 //
Probeset : 1633657_at
Accessions : protein= NP_731887;, nucleotide= NM_169569;
FlyMine data for FBgn0051533.
VDRC has 1 RNAi stocks for FBgn0051533 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head2 ± 00 of 4 0.00Down
Eye0 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland4 ± 20 of 4 0.09Down
Crop1 ± 00 of 4 0.00Down
Midgut3 ± 10 of 4 0.10Down
Tubule2 ± 00 of 4 0.10Down
Hindgut2 ± 10 of 4 0.00Down
Heart0 ± 00 of 4 0.01Down
Fat body2 ± 10 of 4 0.04Down
Ovary1 ± 00 of 4 0.00Down
Testis626 ± 104 of 412.70Up
Male accessory glands6 ± 30 of 4 0.10Down
Virgin spermatheca2 ± 00 of 4 0.04Down
Mated spermatheca1 ± 00 of 4 0.03Down
Adult carcass5 ± 30 of 4 0.10Down
Larval CNS1 ± 00 of 4 0.02Down
Larval Salivary gland4 ± 10 of 4 0.10Down
Larval midgut2 ± 00 of 4 0.04Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.03Down
Larval fat body61 ± 323 of 4 1.20None
Larval trachea1 ± 10 of 4 0.02Down
Larval carcass3 ± 00 of 4 0.08Down
S2 cells (growing)0 ± 00 of 4 0.02Down
Whole fly49 ± 44 of 4

Looking for FBgn0051533. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime