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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051551 through 18771 annotations produced 1 hits



(CG31551):

Annotation Number : CG31551
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051551
Gbrowse : chr3R:1453573-1457755 (+) // 100.0 //
Probeset : 1633244_at
Accessions : protein= NP_730971;, nucleotide= NM_169082;
FlyMine data for FBgn0051551.
VDRC has 3 RNAi stocks for FBgn0051551 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.30None
Head1 ± 00 of 4 0.70None
Eye2 ± 10 of 4 1.69None
Thoracicoabdominal ganglion1 ± 00 of 4 0.80None
Salivary gland10 ± 50 of 4 6.62None
Crop1 ± 00 of 4 1.00None
Midgut2 ± 10 of 4 1.50None
Tubule2 ± 00 of 4 1.50None
Hindgut1 ± 00 of 4 0.70None
Heart0 ± 00 of 4 0.26None
Fat body2 ± 10 of 4 1.77None
Ovary0 ± 00 of 4 0.30None
Testis27 ± 24 of 417.90Up
Male accessory glands1 ± 00 of 4 0.80None
Virgin spermatheca2 ± 10 of 4 1.36None
Mated spermatheca0 ± 00 of 4 0.57None
Adult carcass6 ± 40 of 4 3.90None
Larval CNS0 ± 00 of 4 0.34None
Larval Salivary gland0 ± 00 of 4 0.59None
Larval midgut1 ± 00 of 4 0.82None
Larval tubule3 ± 20 of 4 2.00None
Larval hindgut0 ± 00 of 4 0.49None
Larval fat body6 ± 30 of 4 3.90None
Larval trachea0 ± 00 of 4 0.56None
Larval carcass0 ± 00 of 4 0.61None
S2 cells (growing)0 ± 00 of 4 0.41None
Whole fly1 ± 00 of 4

Looking for FBgn0051551. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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