FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051609 through 18771 annotations produced 1 hits

(CG31609):

Annotation Number : CG31609
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051609
Gbrowse : chr2L:9097626-9098538 (+) // 100.0 //
Probeset : 1629500_at
Accessions : protein= NP_723444;, nucleotide= NM_164847;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity
Interpro : 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation
FlyMine data for FBgn0051609.
VDRC has 1 RNAi stocks for FBgn0051609 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.10	Down
Head	2 ± 0	0 of 4	0.20	Down
Eye	1 ± 0	0 of 4	0.09	Down
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.10	Down
Salivary gland	4 ± 1	0 of 4	0.35	Down
Crop	2 ± 0	0 of 4	0.20	Down
Midgut	3 ± 0	0 of 4	0.30	Down
Tubule	3 ± 0	0 of 4	0.30	Down
Hindgut	2 ± 1	0 of 4	0.20	Down
Heart	1 ± 1	0 of 4	0.15	Down
Fat body	6 ± 1	0 of 4	0.52	Down
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	87 ± 4	4 of 4	7.30	Up
Male accessory glands	3 ± 1	0 of 4	0.30	Down
Virgin spermatheca	2 ± 1	0 of 4	0.23	Down
Mated spermatheca	1 ± 0	0 of 4	0.13	Down
Adult carcass	1 ± 0	0 of 4	0.20	Down
Larval CNS	2 ± 1	0 of 4	0.22	Down
Larval Salivary gland	3 ± 1	0 of 4	0.31	Down
Larval midgut	12 ± 1	0 of 4	1.02	None
Larval tubule	3 ± 1	0 of 4	0.30	Down
Larval hindgut	2 ± 1	0 of 4	0.24	Down
Larval fat body	22 ± 7	3 of 4	1.90	None
Larval trachea	3 ± 3	0 of 4	0.27	Down
Larval carcass	3 ± 1	0 of 4	0.30	Down
S2 cells (growing)	4 ± 1	0 of 4	0.34	Down
Whole fly	12 ± 1	4 of 4

Looking for FBgn0051609. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720