FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051619 through 18771 annotations produced 3 hits

(CG31619):

Annotation Number : CG31619
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051619
Gbrowse : chr2L:21684535-21720275 (+) // 100.0 //
Probeset : 1630226_at
Accessions : protein= NP_001036374; /// NP_001163040; /// NP_724359; /// NP_724360;, nucleotide= NM_001042909; /// NM_001169569; /// NM_165396; /// NM_165397;
Pathway : 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation
Interpro : 0004222 // metalloendopeptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase act
FlyMine data for FBgn0051619.
BDGP gene expression has embryonic in situ data for CG31619: 54 pix of staining in 10 body parts.
Homophila reports that CG31619 is a close match (6e-11) to human gene ARMD1;FBLN6;FIBL6;HMCN1 (NP_114141), a gene associated with {Macular degeneration, age-related, 1}, 603075 (3).
BioGrid reports that CG31619 interacts with CG31839 CG8277 .
VDRC has 2 RNAi stocks for FBgn0051619 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	74 ± 1	4 of 4	13.70	Up
Head	27 ± 1	4 of 4	4.90	Up
Eye	9 ± 1	3 of 4	1.71	None
Thoracicoabdominal ganglion	98 ± 3	4 of 4	18.00	Up
Salivary gland	11 ± 1	0 of 4	2.07	Up
Crop	5 ± 1	0 of 4	1.00	None
Midgut	4 ± 0	0 of 4	0.80	None
Tubule	4 ± 0	0 of 4	0.80	None
Hindgut	4 ± 0	0 of 4	0.90	None
Heart	3 ± 0	0 of 4	0.61	None
Fat body	5 ± 1	0 of 4	0.96	None
Ovary	2 ± 0	0 of 4	0.50	None
Testis	1 ± 0	0 of 4	0.30	None
Male accessory glands	5 ± 2	1 of 4	1.00	None
Virgin spermatheca	4 ± 1	0 of 4	0.89	None
Mated spermatheca	4 ± 1	0 of 4	0.81	None
Adult carcass	6 ± 4	0 of 4	1.20	None
Larval CNS	126 ± 8	4 of 4	23.24	Up
Larval Salivary gland	6 ± 2	1 of 4	1.26	None
Larval midgut	2 ± 1	0 of 4	0.51	None
Larval tubule	3 ± 1	0 of 4	0.60	None
Larval hindgut	3 ± 1	0 of 4	0.56	None
Larval fat body	3 ± 2	0 of 4	0.60	None
Larval trachea	2 ± 1	0 of 4	0.46	None
Larval carcass	2 ± 1	0 of 4	0.49	None
S2 cells (growing)	41 ± 1	4 of 4	7.67	Up
Whole fly	5 ± 1	1 of 4

(CG31619):

Annotation Number : CG31619
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051619
Gbrowse : chr2L:21684535-21729051 (+) // 100.0 //
Probeset : 1640204_at
Accessions : protein= NP_001036374; /// NP_001163040; /// NP_724359; /// NP_724360;, nucleotide= NM_001042909; /// NM_001169569; /// NM_165396; /// NM_165397;
Pathway : 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation
Interpro : 0004222 // metalloendopeptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase act
FlyMine data for FBgn0051619.
BDGP gene expression has embryonic in situ data for CG31619: 54 pix of staining in 10 body parts.
Homophila reports that CG31619 is a close match (6e-11) to human gene ARMD1;FBLN6;FIBL6;HMCN1 (NP_114141), a gene associated with {Macular degeneration, age-related, 1}, 603075 (3).
BioGrid reports that CG31619 interacts with CG31839 CG8277 .
VDRC has 2 RNAi stocks for FBgn0051619 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1477 ± 15	4 of 4	22.10	Up
Head	500 ± 30	4 of 4	7.50	Up
Eye	326 ± 22	4 of 4	4.88	Up
Thoracicoabdominal ganglion	2911 ± 77	4 of 4	43.50	Up
Salivary gland	6 ± 3	0 of 4	0.10	Down
Crop	33 ± 3	4 of 4	0.50	Down
Midgut	29 ± 1	4 of 4	0.40	Down
Tubule	3 ± 1	0 of 4	0.00	Down
Hindgut	10 ± 0	2 of 4	0.20	Down
Heart	13 ± 0	4 of 4	0.20	Down
Fat body	5 ± 3	1 of 4	0.08	Down
Ovary	2 ± 1	1 of 4	0.00	Down
Testis	1 ± 0	1 of 4	0.00	Down
Male accessory glands	2 ± 1	0 of 4	0.00	Down
Virgin spermatheca	0 ± 0	0 of 4	0.01	Down
Mated spermatheca	1 ± 0	0 of 4	0.02	Down
Adult carcass	17 ± 4	2 of 4	0.30	Down
Larval CNS	752 ± 35	4 of 4	11.26	Up
Larval Salivary gland	4 ± 1	0 of 4	0.07	Down
Larval midgut	2 ± 0	0 of 4	0.03	Down
Larval tubule	6 ± 1	0 of 4	0.10	Down
Larval hindgut	5 ± 1	1 of 4	0.08	Down
Larval fat body	1 ± 0	0 of 4	0.00	Down
Larval trachea	5 ± 5	1 of 4	0.08	Down
Larval carcass	2 ± 1	0 of 4	0.03	Down
S2 cells (growing)	984 ± 18	4 of 4	14.72	Up
Whole fly	66 ± 6	4 of 4

(CG31619):

Annotation Number : CG31619
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051619
Gbrowse : chr2L:21684535-21720275 (+) // 100.0 //
Probeset : 1626869_a_at
Accessions : protein= NP_001036374; /// NP_001163040; /// NP_724359; /// NP_724360;, nucleotide= NM_001042909; /// NM_001169569; /// NM_165396; /// NM_165397;
Pathway : 0005578 // proteinaceous extracellular matrix // inferred from electronic annotation
Interpro : 0004222 // metalloendopeptidase activity // inferred from sequence or structural similarity /// 0008233 // peptidase act
FlyMine data for FBgn0051619.
BDGP gene expression has embryonic in situ data for CG31619: 54 pix of staining in 10 body parts.
Homophila reports that CG31619 is a close match (6e-11) to human gene ARMD1;FBLN6;FIBL6;HMCN1 (NP_114141), a gene associated with {Macular degeneration, age-related, 1}, 603075 (3).
BioGrid reports that CG31619 interacts with CG31839 CG8277 .
VDRC has 2 RNAi stocks for FBgn0051619 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	95 ± 4	4 of 4	29.80	Up
Head	27 ± 2	4 of 4	8.50	Up
Eye	12 ± 1	3 of 4	3.90	Up
Thoracicoabdominal ganglion	184 ± 14	4 of 4	57.50	Up
Salivary gland	7 ± 1	0 of 4	2.47	None
Crop	4 ± 3	0 of 4	1.30	None
Midgut	4 ± 1	0 of 4	1.40	None
Tubule	1 ± 0	0 of 4	0.60	Down
Hindgut	2 ± 0	0 of 4	0.80	None
Heart	6 ± 0	0 of 4	1.90	Up
Fat body	4 ± 5	0 of 4	1.32	None
Ovary	2 ± 1	0 of 4	0.60	None
Testis	5 ± 1	0 of 4	1.80	None
Male accessory glands	1 ± 0	0 of 4	0.50	None
Virgin spermatheca	3 ± 1	0 of 4	1.02	None
Mated spermatheca	2 ± 0	0 of 4	0.64	None
Adult carcass	2 ± 1	0 of 4	0.90	None
Larval CNS	72 ± 4	4 of 4	22.66	Up
Larval Salivary gland	10 ± 0	0 of 4	3.41	Up
Larval midgut	10 ± 3	0 of 4	3.27	None
Larval tubule	1 ± 0	0 of 4	0.30	None
Larval hindgut	0 ± 0	0 of 4	0.26	Down
Larval fat body	4 ± 1	0 of 4	1.50	None
Larval trachea	5 ± 4	0 of 4	1.76	None
Larval carcass	1 ± 0	0 of 4	0.57	None
S2 cells (growing)	222 ± 13	4 of 4	69.39	Up
Whole fly	3 ± 0	0 of 4

Looking for FBgn0051619. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720