Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051626 through 18771 annotations produced 1 hits



(CG31626):

Annotation Number : CG31626
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051626
Gbrowse : chr2L:21232483-21236733 (-) // 100.0 //
Probeset : 1629492_s_at
Accessions : protein= NP_724320; /// NP_724321;, nucleotide= NM_165362; /// NM_165363;
FlyMine data for FBgn0051626.
BDGP gene expression has embryonic in situ data for CG31626: 11 pix of staining in 6 body parts.
BioGrid reports that CG31626 interacts with CG3187 CG32036 CG33017 CG14578 CG4821 CG5225 CG6607 CG7109 CG9908 CG17757 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain18 ± 14 of 4 0.50None
Head43 ± 34 of 4 1.10None
Eye54 ± 64 of 4 1.33None
Thoracicoabdominal ganglion40 ± 64 of 4 1.00None
Salivary gland19 ± 30 of 4 0.47None
Crop141 ± 34 of 4 3.50Up
Midgut3 ± 10 of 4 0.10None
Tubule13 ± 00 of 4 0.30Down
Hindgut41 ± 24 of 4 1.00None
Heart16 ± 13 of 4 0.40None
Fat body52 ± 74 of 4 1.29None
Ovary4 ± 10 of 4 0.10None
Testis17 ± 14 of 4 0.40None
Male accessory glands11 ± 30 of 4 0.30None
Virgin spermatheca17 ± 32 of 4 0.42None
Mated spermatheca17 ± 22 of 4 0.42None
Adult carcass50 ± 34 of 4 1.20None
Larval CNS18 ± 21 of 4 0.45None
Larval Salivary gland10 ± 20 of 4 0.26None
Larval midgut1 ± 00 of 4 0.03None
Larval tubule7 ± 10 of 4 0.20None
Larval hindgut77 ± 114 of 4 1.90None
Larval fat body11 ± 20 of 4 0.30None
Larval trachea26 ± 51 of 4 0.65None
Larval carcass20 ± 10 of 4 0.49None
S2 cells (growing)31 ± 24 of 4 0.78None
Whole fly40 ± 163 of 4

Looking for FBgn0051626. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime