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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0051633 through 18771 annotations produced 1 hits


Annotation Number : CG31633
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051633
Gbrowse : chr2L:6654753-6656301 (-) // 100.0 //
Probeset : 1623426_at
Accessions : protein= NP_723199;, nucleotide= NM_164698;
FlyMine data for FBgn0051633.
VDRC has 1 RNAi stocks for FBgn0051633 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain71 14 of 4 1.00None
Head72 24 of 4 1.00None
Eye104 54 of 4 1.48Up
Thoracicoabdominal ganglion66 24 of 4 0.90None
Salivary gland93 64 of 4 1.32Up
Crop82 24 of 4 1.20None
Midgut174 44 of 4 2.50Up
Tubule125 84 of 4 1.80Up
Hindgut96 24 of 4 1.40Up
Heart98 34 of 4 1.40Up
Fat body78 84 of 4 1.11None
Ovary97 04 of 4 1.40Up
Testis99 54 of 4 1.40Up
Male accessory glands84 54 of 4 1.20None
Virgin spermatheca46 14 of 4 0.66Down
Mated spermatheca52 44 of 4 0.75Down
Adult carcass71 24 of 4 1.00None
Larval CNS46 54 of 4 0.65Down
Larval Salivary gland51 24 of 4 0.73Down
Larval midgut148 54 of 4 2.10Up
Larval tubule122 84 of 4 1.70Up
Larval hindgut61 24 of 4 0.87None
Larval fat body57 54 of 4 0.80None
Larval trachea70 34 of 4 1.00None
Larval carcass36 34 of 4 0.51Down
S2 cells (growing)30 14 of 4 0.43Down
Whole fly70 44 of 4

Looking for FBgn0051633. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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