Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051635 through 18771 annotations produced 2 hits



(CG31635):

Annotation Number : GM03875
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051635
Gbrowse : chr2L:6646748-6649035 (-) // 100.0 //
Probeset : 1634884_s_at
Accessions : protein= NP_001097102; /// NP_723197;, nucleotide= NM_001103632; /// NM_164696;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0051635.
BDGP gene expression has embryonic in situ data for CG31635: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0051635 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain43 ± 24 of 4 3.00Up
Head18 ± 14 of 4 1.30None
Eye19 ± 23 of 4 1.36None
Thoracicoabdominal ganglion30 ± 24 of 4 2.10Up
Salivary gland23 ± 40 of 4 1.59None
Crop43 ± 34 of 4 3.00Up
Midgut25 ± 44 of 4 1.70None
Tubule13 ± 12 of 4 0.90None
Hindgut26 ± 24 of 4 1.80Up
Heart23 ± 34 of 4 1.59None
Fat body27 ± 44 of 4 1.90Up
Ovary12 ± 03 of 4 0.80None
Testis16 ± 14 of 4 1.20None
Male accessory glands20 ± 12 of 4 1.40Up
Virgin spermatheca13 ± 13 of 4 0.92None
Mated spermatheca7 ± 21 of 4 0.55Down
Adult carcass35 ± 24 of 4 2.50Up
Larval CNS21 ± 44 of 4 1.50Up
Larval Salivary gland8 ± 20 of 4 0.57None
Larval midgut11 ± 22 of 4 0.80None
Larval tubule16 ± 14 of 4 1.10None
Larval hindgut7 ± 01 of 4 0.54Down
Larval fat body29 ± 03 of 4 2.00Up
Larval trachea19 ± 14 of 4 1.35Up
Larval carcass6 ± 10 of 4 0.43Down
S2 cells (growing)15 ± 22 of 4 1.08None
Whole fly14 ± 14 of 4



(CG31635):

Annotation Number : CG31635
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051635
Gbrowse : chr2L:6635544-6649088 (-) // 100.0 //
Probeset : 1634458_at
Accessions : protein= NP_001097102; /// NP_723197;, nucleotide= NM_001103632; /// NM_164696;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0051635.
BDGP gene expression has embryonic in situ data for CG31635: 4 pix of staining in 1 body parts.
BioGrid reports that CG31635 interacts with CG9578 .
VDRC has 2 RNAi stocks for FBgn0051635 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 ± 14 of 4 0.40Down
Head6 ± 20 of 4 0.20Down
Eye4 ± 10 of 4 0.14Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.10Down
Salivary gland17 ± 12 of 4 0.58Down
Crop17 ± 11 of 4 0.60Down
Midgut5 ± 10 of 4 0.20Down
Tubule9 ± 10 of 4 0.30Down
Hindgut8 ± 10 of 4 0.30Down
Heart7 ± 22 of 4 0.26Down
Fat body19 ± 72 of 4 0.65None
Ovary52 ± 14 of 4 1.70Up
Testis157 ± 114 of 4 5.20Up
Male accessory glands8 ± 30 of 4 0.30Down
Virgin spermatheca8 ± 01 of 4 0.27Down
Mated spermatheca4 ± 21 of 4 0.13Down
Adult carcass20 ± 30 of 4 0.70None
Larval CNS7 ± 11 of 4 0.24Down
Larval Salivary gland4 ± 21 of 4 0.16Down
Larval midgut7 ± 21 of 4 0.25Down
Larval tubule4 ± 10 of 4 0.10Down
Larval hindgut2 ± 10 of 4 0.08Down
Larval fat body21 ± 81 of 4 0.70None
Larval trachea4 ± 20 of 4 0.14Down
Larval carcass3 ± 10 of 4 0.10Down
S2 cells (growing)20 ± 14 of 4 0.67None
Whole fly30 ± 44 of 4

Looking for FBgn0051635. 2 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime