Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051660 through 18771 annotations produced 1 hits



chr2L:4852864-4875233 (+) // 100.0 // (poor gastrulation):

Annotation Number : CG31660
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1635488_at
Accessions : protein= , nucleotide= NP_001014465; /// NP_723019;
Pathway : 0007165 // signal transduction // inferred from electronic annotation /// 0007186 // G-protein coupled receptor protein
Interpro : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for full length.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain321 ± 154 of 425.20Up
Head40 ± 24 of 4 3.20Up
Eye40 ± 24 of 4 3.18Up
Thoracicoabdominal ganglion191 ± 104 of 415.00Up
Salivary gland9 ± 40 of 4 0.77None
Crop5 ± 10 of 4 0.40Down
Midgut9 ± 30 of 4 0.70None
Tubule8 ± 10 of 4 0.60Down
Hindgut5 ± 00 of 4 0.40Down
Heart2 ± 00 of 4 0.19Down
Fat body14 ± 81 of 4 1.13None
Ovary4 ± 10 of 4 0.30Down
Testis4 ± 00 of 4 0.40Down
Male accessory glands15 ± 22 of 4 1.20None
Virgin spermatheca13 ± 00 of 4 1.03None
Mated spermatheca19 ± 30 of 4 1.52None
Adult carcass14 ± 30 of 4 1.10None
Larval CNS246 ± 194 of 419.31Up
Larval Salivary gland7 ± 20 of 4 0.59None
Larval midgut12 ± 10 of 4 0.98None
Larval tubule6 ± 10 of 4 0.50None
Larval hindgut6 ± 10 of 4 0.51Down
Larval fat body7 ± 20 of 4 0.50None
Larval trachea7 ± 41 of 4 0.57None
Larval carcass10 ± 10 of 4 0.83None
S2 cells (growing)5 ± 10 of 4 0.41Down
Whole fly12 ± 22 of 4

Looking for FBgn0051660. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime