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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051687 through 18771 annotations produced 1 hits



/// (CG31687 /// CG31688):

Annotation Number : CG31687
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051687 /// FBgn0051688
Gbrowse : chr2L:20450268-20452538 (+) // 99.95 // /// chr2L:20442295-20443420 (+) // 51.68 // /// chr2L:20459385-20460527 (+) // 48.32 //
Probeset : 1632888_s_at
Accessions : protein= NP_001137843; /// NP_001163022; /// NP_610035; /// NP_724266;, nucleotide= NM_001144371; /// NM_001169551; /// NM_136191; /// NM_165331;
Pathway : 0005680 // anaphase-promoting complex // inferred from electronic annotation
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0051687 /// FBgn0051688.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain12 ± 00 of 4 0.50Down
Head9 ± 40 of 4 0.30Down
Eye3 ± 10 of 4 0.13Down
Thoracicoabdominal ganglion16 ± 40 of 4 0.60None
Salivary gland42 ± 60 of 4 1.53None
Crop25 ± 12 of 4 0.90None
Midgut38 ± 20 of 4 1.40Up
Tubule13 ± 30 of 4 0.50Down
Hindgut26 ± 51 of 4 1.00None
Heart6 ± 10 of 4 0.22Down
Fat body28 ± 101 of 4 1.03None
Ovary41 ± 24 of 4 1.50Up
Testis8 ± 20 of 4 0.30Down
Male accessory glands28 ± 70 of 4 1.00None
Virgin spermatheca10 ± 00 of 4 0.38Down
Mated spermatheca5 ± 30 of 4 0.21Down
Adult carcass30 ± 10 of 4 1.10None
Larval CNS22 ± 34 of 4 0.79None
Larval Salivary gland45 ± 54 of 4 1.63Up
Larval midgut30 ± 20 of 4 1.11None
Larval tubule27 ± 32 of 4 1.00None
Larval hindgut32 ± 13 of 4 1.16None
Larval fat body29 ± 40 of 4 1.00None
Larval trachea12 ± 23 of 4 0.43Down
Larval carcass32 ± 30 of 4 1.16None
S2 cells (growing)71 ± 44 of 4 2.58Up
Whole fly27 ± 24 of 4

Looking for FBgn0051687. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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