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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051710 through 18771 annotations produced 1 hits



(CG31710):

Annotation Number : CG31710
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051710
Gbrowse : chr2L:9703081-9705944 (-) // 100.0 //
Probeset : 1624929_at
Accessions : protein= NP_723480;, nucleotide= NM_164867;
FlyMine data for FBgn0051710.
VDRC has 3 RNAi stocks for FBgn0051710 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain57 ± 14 of 4 1.20Up
Head115 ± 64 of 4 2.50Up
Eye271 ± 384 of 4 5.94Up
Thoracicoabdominal ganglion74 ± 54 of 4 1.60Up
Salivary gland135 ± 164 of 4 2.96Up
Crop38 ± 24 of 4 0.90None
Midgut79 ± 34 of 4 1.70Up
Tubule108 ± 144 of 4 2.40Up
Hindgut63 ± 14 of 4 1.40Up
Heart58 ± 34 of 4 1.29Up
Fat body21 ± 24 of 4 0.46Down
Ovary21 ± 24 of 4 0.50Down
Testis18 ± 14 of 4 0.40Down
Male accessory glands42 ± 24 of 4 0.90None
Virgin spermatheca14 ± 24 of 4 0.32Down
Mated spermatheca17 ± 24 of 4 0.39Down
Adult carcass70 ± 44 of 4 1.50Up
Larval CNS39 ± 34 of 4 0.86Down
Larval Salivary gland361 ± 204 of 4 7.91Up
Larval midgut93 ± 64 of 4 2.04Up
Larval tubule68 ± 34 of 4 1.50Up
Larval hindgut83 ± 74 of 4 1.82Up
Larval fat body25 ± 62 of 4 0.50Down
Larval trachea491 ± 344 of 410.75Up
Larval carcass134 ± 184 of 4 2.93Up
S2 cells (growing)49 ± 34 of 4 1.09None
Whole fly45 ± 14 of 4

Looking for FBgn0051710. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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