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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051730 through 18771 annotations produced 1 hits



(CG31730):

Annotation Number : CG31730
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051730
Gbrowse : chr2L:13259146-13259635 (-) // 100.0 //
Probeset : 1623587_at
Accessions : protein= NP_723799;, nucleotide= NM_165033;
Interpro : 0008080 // N-acetyltransferase activity // inferred from sequence or structural similarity /// 0008080 // N-acetyltransf
FlyMine data for FBgn0051730.
VDRC has 3 RNAi stocks for FBgn0051730 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.10Down
Head3 ± 10 of 4 0.10Down
Eye3 ± 10 of 4 0.06Down
Thoracicoabdominal ganglion2 ± 10 of 4 0.00Down
Salivary gland10 ± 30 of 4 0.20Down
Crop6 ± 10 of 4 0.10Down
Midgut1 ± 00 of 4 0.00Down
Tubule3 ± 00 of 4 0.10Down
Hindgut5 ± 20 of 4 0.10Down
Heart3 ± 11 of 4 0.05Down
Fat body7 ± 33 of 4 0.14Down
Ovary3 ± 00 of 4 0.10Down
Testis655 ± 164 of 411.90Up
Male accessory glands10 ± 22 of 4 0.20Down
Virgin spermatheca3 ± 10 of 4 0.06Down
Mated spermatheca3 ± 10 of 4 0.07Down
Adult carcass7 ± 20 of 4 0.10Down
Larval CNS1 ± 10 of 4 0.03Down
Larval Salivary gland6 ± 01 of 4 0.11Down
Larval midgut2 ± 10 of 4 0.04Down
Larval tubule6 ± 00 of 4 0.10Down
Larval hindgut2 ± 10 of 4 0.04Down
Larval fat body51 ± 254 of 4 0.90None
Larval trachea4 ± 22 of 4 0.08Down
Larval carcass2 ± 00 of 4 0.04Down
S2 cells (growing)1 ± 00 of 4 0.02Down
Whole fly54 ± 24 of 4

Looking for FBgn0051730. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime