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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051735 through 18771 annotations produced 1 hits



(CG31735):

Annotation Number : CG31735
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051735
Gbrowse : chr2L:15895559-15897071 (+) // 100.0 //
Probeset : 1632398_a_at
Accessions : protein= NP_723937; /// NP_723938;, nucleotide= NM_165136; /// NM_165137;
Interpro : 0032027 // myosin light chain binding // inferred from reviewed computational analysis
FlyMine data for FBgn0051735.
VDRC has 1 RNAi stocks for FBgn0051735 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.00Down
Head3 10 of 4 0.00Down
Eye3 10 of 4 0.03Down
Thoracicoabdominal ganglion2 11 of 4 0.00Down
Salivary gland4 20 of 4 0.04Down
Crop1 00 of 4 0.00Down
Midgut1 00 of 4 0.00Down
Tubule2 00 of 4 0.00Down
Hindgut2 00 of 4 0.00Down
Heart1 00 of 4 0.01Down
Fat body5 30 of 4 0.05Down
Ovary1 00 of 4 0.00Down
Testis1324 304 of 412.60Up
Male accessory glands6 20 of 4 0.10Down
Virgin spermatheca1 00 of 4 0.02Down
Mated spermatheca3 10 of 4 0.03Down
Adult carcass7 00 of 4 0.10Down
Larval CNS1 10 of 4 0.02Down
Larval Salivary gland2 00 of 4 0.02Down
Larval midgut4 10 of 4 0.05Down
Larval tubule1 00 of 4 0.00Down
Larval hindgut2 00 of 4 0.02Down
Larval fat body162 874 of 4 1.50None
Larval trachea9 101 of 4 0.09Down
Larval carcass1 00 of 4 0.01Down
S2 cells (growing)1 00 of 4 0.01Down
Whole fly105 34 of 4

Looking for FBgn0051735. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime