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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051740 through 18771 annotations produced 1 hits



(CG31740):

Annotation Number : CG31740
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051740
Gbrowse : chr2L:18008927-18009702 (+) // 100.0 //
Probeset : 1624711_at
Accessions : protein= NP_724084;, nucleotide= NM_165235;
FlyMine data for FBgn0051740.
VDRC has 3 RNAi stocks for FBgn0051740 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 ± 00 of 4 0.00Down
Head15 ± 61 of 4 0.00Down
Eye7 ± 11 of 4 0.00Down
Thoracicoabdominal ganglion8 ± 20 of 4 0.00Down
Salivary gland26 ± 50 of 4 0.01Down
Crop12 ± 32 of 4 0.00Down
Midgut8 ± 20 of 4 0.00Down
Tubule15 ± 21 of 4 0.00Down
Hindgut8 ± 20 of 4 0.00Down
Heart11 ± 02 of 4 0.01Down
Fat body16 ± 53 of 4 0.01Down
Ovary5 ± 00 of 4 0.00Down
Testis3043 ± 1734 of 4 1.70Up
Male accessory glands15 ± 21 of 4 0.00Down
Virgin spermatheca13 ± 12 of 4 0.01Down
Mated spermatheca36 ± 104 of 4 0.02Down
Adult carcass63 ± 183 of 4 0.00Down
Larval CNS8 ± 14 of 4 0.00Down
Larval Salivary gland15 ± 20 of 4 0.01Down
Larval midgut19 ± 40 of 4 0.01Down
Larval tubule12 ± 21 of 4 0.00Down
Larval hindgut11 ± 12 of 4 0.01Down
Larval fat body1168 ± 4064 of 4 0.70None
Larval trachea84 ± 1303 of 4 0.05Down
Larval carcass16 ± 32 of 4 0.01Down
S2 cells (growing)9 ± 11 of 4 0.01Down
Whole fly1778 ± 1614 of 4

Looking for FBgn0051740. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime