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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051759 through 18771 annotations produced 1 hits



(CG31759):

Annotation Number : CG31759
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051759
Gbrowse : chr2L:12207626-12210110 (+) // 99.63 //
Probeset : 1631299_s_at
Accessions : protein= NP_723735; /// NP_723736;, nucleotide= NM_165000; /// NM_165001;
Interpro : 0008168 // methyltransferase activity // inferred from electronic annotation /// 0016740 // transferase activity // infe
FlyMine data for FBgn0051759.
BDGP gene expression has embryonic in situ data for CG31759: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0051759 available for purchase.
VDRC has 3 RNAi stocks for FBgn0051759 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain10 ± 11 of 4 0.30Down
Head11 ± 21 of 4 0.40Down
Eye13 ± 22 of 4 0.46Down
Thoracicoabdominal ganglion13 ± 00 of 4 0.40Down
Salivary gland22 ± 70 of 4 0.77None
Crop13 ± 10 of 4 0.50Down
Midgut13 ± 00 of 4 0.50Down
Tubule30 ± 31 of 4 1.10None
Hindgut13 ± 10 of 4 0.40Down
Heart27 ± 41 of 4 0.92None
Fat body57 ± 103 of 4 1.98Up
Ovary57 ± 24 of 4 2.00Up
Testis57 ± 54 of 4 2.00Up
Male accessory glands14 ± 10 of 4 0.50Down
Virgin spermatheca93 ± 54 of 4 3.19Up
Mated spermatheca85 ± 74 of 4 2.93Up
Adult carcass31 ± 20 of 4 1.10None
Larval CNS41 ± 104 of 4 1.41None
Larval Salivary gland10 ± 20 of 4 0.35Down
Larval midgut8 ± 20 of 4 0.27Down
Larval tubule4 ± 10 of 4 0.10Down
Larval hindgut22 ± 30 of 4 0.78None
Larval fat body54 ± 62 of 4 1.80Up
Larval trachea22 ± 64 of 4 0.78None
Larval carcass12 ± 30 of 4 0.44Down
S2 cells (growing)16 ± 41 of 4 0.57None
Whole fly29 ± 30 of 4

Looking for FBgn0051759. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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