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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051769 through 18771 annotations produced 1 hits



(CG31769):

Annotation Number : CG31769
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051769
Gbrowse : chr2L:14109590-14110739 (-) // 100.0 //
Probeset : 1624128_at
Accessions : protein= NP_723866;, nucleotide= NM_165083;
FlyMine data for FBgn0051769.
BDGP gene expression has embryonic in situ data for CG31769: 2 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0051769 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain15 24 of 4 0.20Down
Head581 564 of 4 5.60Up
Eye139 164 of 4 1.34None
Thoracicoabdominal ganglion13 23 of 4 0.10Down
Salivary gland1 00 of 4 0.02Down
Crop372 154 of 4 3.60Up
Midgut2 00 of 4 0.00Down
Tubule12 23 of 4 0.10Down
Hindgut45 24 of 4 0.40Down
Heart264 224 of 4 2.54Up
Fat body488 324 of 4 4.69Up
Ovary2 00 of 4 0.00Down
Testis0 00 of 4 0.00Down
Male accessory glands1 10 of 4 0.00Down
Virgin spermatheca556 304 of 4 5.35Up
Mated spermatheca439 1114 of 4 4.23None
Adult carcass580 284 of 4 5.60Up
Larval CNS3 00 of 4 0.03Down
Larval Salivary gland7 22 of 4 0.07Down
Larval midgut1 00 of 4 0.02Down
Larval tubule1 10 of 4 0.00Down
Larval hindgut6 21 of 4 0.07Down
Larval fat body97 234 of 4 0.90None
Larval trachea8 23 of 4 0.08Down
Larval carcass2 10 of 4 0.02Down
S2 cells (growing)9 14 of 4 0.09Down
Whole fly104 54 of 4

Looking for FBgn0051769. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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