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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051779 through 18771 annotations produced 1 hits



Acp24A4 (Acp24A4):

Annotation Number : CG31779
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051779
Gbrowse : chr2L:3693554-3694284 (-) // 100.0 //
Probeset : 1632872_at
Accessions : protein= NP_001036330; /// NP_608798;, nucleotide= NM_001042865; /// NM_134954;
Interpro : 0004867 // serine-type endopeptidase inhibitor activity // inferred from sequence or structural similarity /// 0004867 /
FlyMine data for FBgn0051779.
VDRC has 2 RNAi stocks for FBgn0051779 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.00Down
Head5 00 of 4 0.10Down
Eye2 00 of 4 0.03Down
Thoracicoabdominal ganglion4 10 of 4 0.00Down
Salivary gland2 00 of 4 0.02Down
Crop1 00 of 4 0.00Down
Midgut1 00 of 4 0.00Down
Tubule1 00 of 4 0.00Down
Hindgut24 14 of 4 0.20Down
Heart3 10 of 4 0.04Down
Fat body13 43 of 4 0.13Down
Ovary0 00 of 4 0.00Down
Testis0 00 of 4 0.00Down
Male accessory glands3 10 of 4 0.00Down
Virgin spermatheca20 14 of 4 0.20Down
Mated spermatheca13 42 of 4 0.13Down
Adult carcass15 71 of 4 0.20Down
Larval CNS1 20 of 4 0.02Down
Larval Salivary gland2 10 of 4 0.03Down
Larval midgut0 00 of 4 0.01Down
Larval tubule2 10 of 4 0.00Down
Larval hindgut5 10 of 4 0.06Down
Larval fat body60 84 of 4 0.60Down
Larval trachea5 31 of 4 0.05Down
Larval carcass1 10 of 4 0.02Down
S2 cells (growing)0 00 of 4 0.01Down
Whole fly99 94 of 4

Looking for FBgn0051779. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime