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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051784 through 18771 annotations produced 1 hits



(CG31784):

Annotation Number : CG31784
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr2L:17102431-17125875 (-) // 100.0 //
Probeset : 1623528_a_at
Accessions : protein= NP_724035; /// NP_724036;, nucleotide= NM_165203; /// NM_165204;


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.80None
Head2 10 of 4 1.30None
Eye2 00 of 4 1.16None
Thoracicoabdominal ganglion2 10 of 4 1.20None
Salivary gland2 00 of 4 1.25None
Crop5 00 of 4 2.60Up
Midgut4 00 of 4 2.10Up
Tubule4 00 of 4 2.20Up
Hindgut2 00 of 4 1.10None
Heart2 10 of 4 1.49None
Fat body2 30 of 4 1.47None
Ovary1 00 of 4 0.80None
Testis0 00 of 4 0.30None
Male accessory glands3 10 of 4 2.00None
Virgin spermatheca3 10 of 4 1.75None
Mated spermatheca3 00 of 4 1.90Up
Adult carcass3 10 of 4 1.80None
Larval CNS1 00 of 4 0.81None
Larval Salivary gland4 10 of 4 2.51None
Larval midgut1 00 of 4 0.49None
Larval tubule1 00 of 4 0.50None
Larval hindgut1 00 of 4 0.73None
Larval fat body2 10 of 4 1.50None
Larval trachea2 10 of 4 1.32None
Larval carcass3 10 of 4 1.88None
S2 cells (growing)1 00 of 4 0.70None
Whole fly1 00 of 4

Looking for FBgn0051784. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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