Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0051788 through 18771 annotations produced 1 hits


(CG31788):

Annotation Number : CG31788
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051788
Gbrowse : chr2L:18257492-18257892 (-) // 100.0 //
Probeset : 1634126_at
Accessions : protein= NP_724104;, nucleotide= NM_165247;
FlyMine data for FBgn0051788.
VDRC has 1 RNAi stocks for FBgn0051788 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 ± 13 of 4 0.00Down
Head3 ± 21 of 4 0.00Down
Eye1 ± 00 of 4 0.00Down
Thoracicoabdominal ganglion4 ± 02 of 4 0.00Down
Salivary gland12 ± 50 of 4 0.05Down
Crop2 ± 00 of 4 0.00Down
Midgut3 ± 11 of 4 0.00Down
Tubule4 ± 01 of 4 0.00Down
Hindgut1 ± 00 of 4 0.00Down
Heart4 ± 11 of 4 0.02Down
Fat body3 ± 12 of 4 0.01Down
Ovary0 ± 00 of 4 0.00Down
Testis2506 ± 864 of 4 9.80Up
Male accessory glands30 ± 94 of 4 0.10Down
Virgin spermatheca1 ± 00 of 4 0.01Down
Mated spermatheca4 ± 11 of 4 0.02Down
Adult carcass13 ± 43 of 4 0.10Down
Larval CNS2 ± 02 of 4 0.01Down
Larval Salivary gland2 ± 00 of 4 0.01Down
Larval midgut5 ± 11 of 4 0.02Down
Larval tubule2 ± 10 of 4 0.00Down
Larval hindgut3 ± 03 of 4 0.01Down
Larval fat body548 ± 3034 of 4 2.10None
Larval trachea13 ± 94 of 4 0.05Down
Larval carcass3 ± 11 of 4 0.01Down
S2 cells (growing)1 ± 00 of 4 0.00Down
Whole fly255 ± 114 of 4

Looking for FBgn0051788. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime