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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051789 through 18771 annotations produced 1 hits



(CG31789):

Annotation Number : CG31789
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051789
Gbrowse : chr2L:18605941-18606523 (+) // 100.0 //
Probeset : 1630692_at
Accessions : protein= NP_724118;, nucleotide= NM_165256;
FlyMine data for FBgn0051789.
VDRC has 3 RNAi stocks for FBgn0051789 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 1.50Up
Head1 ± 00 of 4 0.60None
Eye2 ± 10 of 4 1.22None
Thoracicoabdominal ganglion2 ± 00 of 4 1.00None
Salivary gland4 ± 10 of 4 2.03None
Crop3 ± 10 of 4 1.50None
Midgut41 ± 171 of 418.20None
Tubule2 ± 00 of 4 1.10None
Hindgut4 ± 00 of 4 2.20Up
Heart2 ± 00 of 4 0.93None
Fat body4 ± 20 of 4 1.76None
Ovary2 ± 00 of 4 1.30None
Testis3 ± 00 of 4 1.50None
Male accessory glands1 ± 00 of 4 0.70None
Virgin spermatheca2 ± 10 of 4 1.29None
Mated spermatheca4 ± 20 of 4 1.87None
Adult carcass1 ± 00 of 4 0.60None
Larval CNS3 ± 10 of 4 1.51None
Larval Salivary gland6 ± 00 of 4 2.76Up
Larval midgut6716 ± 2254 of 42985.11Up
Larval tubule1 ± 00 of 4 0.60None
Larval hindgut17 ± 32 of 4 7.64Up
Larval fat body109 ± 603 of 448.60None
Larval trachea225 ± 4072 of 4100.20None
Larval carcass8 ± 20 of 4 3.92None
S2 cells (growing)2 ± 00 of 4 1.28None
Whole fly2 ± 00 of 4

Looking for FBgn0051789. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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