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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0051797 through 18771 annotations produced 1 hits


Annotation Number : CG31797
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051797
Gbrowse : chr2L:19259526-19262133 (-) // 100.0 //
Probeset : 1637709_at
Accessions : protein= NP_724173;, nucleotide= NM_165285;
FlyMine data for FBgn0051797.
BioGrid reports that CG31797 interacts with CG7171 CG8291 .
VDRC has 1 RNAi stocks for FBgn0051797 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 10 of 4 0.30Down
Head4 20 of 4 0.30Down
Eye1 10 of 4 0.09Down
Thoracicoabdominal ganglion4 20 of 4 0.30Down
Salivary gland8 30 of 4 0.55None
Crop5 10 of 4 0.30Down
Midgut3 00 of 4 0.20Down
Tubule3 00 of 4 0.20Down
Hindgut9 20 of 4 0.60None
Heart1 00 of 4 0.07Down
Fat body9 60 of 4 0.60None
Ovary4 10 of 4 0.30Down
Testis144 54 of 4 9.00Up
Male accessory glands5 20 of 4 0.30Down
Virgin spermatheca9 20 of 4 0.60None
Mated spermatheca6 10 of 4 0.42Down
Adult carcass4 10 of 4 0.30Down
Larval CNS4 40 of 4 0.30Down
Larval Salivary gland5 20 of 4 0.33Down
Larval midgut6 20 of 4 0.38Down
Larval tubule3 20 of 4 0.20Down
Larval hindgut7 10 of 4 0.47Down
Larval fat body25 61 of 4 1.60None
Larval trachea4 30 of 4 0.28Down
Larval carcass4 20 of 4 0.30Down
S2 cells (growing)6 10 of 4 0.38Down
Whole fly16 20 of 4

Looking for FBgn0051797. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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