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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051805 through 18771 annotations produced 1 hits



(CG31805):

Annotation Number : CG31805
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051805
Gbrowse : chr2L:16898261-16900299 (-) // 100.0 //
Probeset : 1639556_at
Accessions : protein= NP_724028;, nucleotide= NM_165201;
FlyMine data for FBgn0051805.
VDRC has 1 RNAi stocks for FBgn0051805 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head5 ± 21 of 4 0.30Down
Eye4 ± 11 of 4 0.19Down
Thoracicoabdominal ganglion6 ± 10 of 4 0.30Down
Salivary gland6 ± 20 of 4 0.27Down
Crop6 ± 10 of 4 0.30Down
Midgut5 ± 20 of 4 0.20Down
Tubule3 ± 00 of 4 0.20Down
Hindgut4 ± 10 of 4 0.20Down
Heart4 ± 10 of 4 0.19Down
Fat body12 ± 20 of 4 0.54Down
Ovary1 ± 00 of 4 0.10Down
Testis327 ± 94 of 414.70Up
Male accessory glands4 ± 20 of 4 0.20Down
Virgin spermatheca5 ± 10 of 4 0.27Down
Mated spermatheca6 ± 20 of 4 0.28Down
Adult carcass10 ± 40 of 4 0.50None
Larval CNS2 ± 10 of 4 0.13Down
Larval Salivary gland3 ± 10 of 4 0.17Down
Larval midgut8 ± 10 of 4 0.36Down
Larval tubule3 ± 10 of 4 0.10Down
Larval hindgut5 ± 00 of 4 0.23Down
Larval fat body52 ± 303 of 4 2.40None
Larval trachea7 ± 11 of 4 0.35Down
Larval carcass8 ± 10 of 4 0.37Down
S2 cells (growing)8 ± 01 of 4 0.38Down
Whole fly22 ± 14 of 4

Looking for FBgn0051805. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime