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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051815 through 18771 annotations produced 1 hits



(CG31815):

Annotation Number : CG31815
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051815
Gbrowse : chr2L:16601912-16607277 (+) // 100.0 //
Probeset : 1626486_at
Accessions : protein= NP_723979;, nucleotide= NM_165167;
FlyMine data for FBgn0051815.
VDRC has 1 RNAi stocks for FBgn0051815 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 10 of 4 0.30Down
Head0 00 of 4 0.10Down
Eye0 00 of 4 0.11Down
Thoracicoabdominal ganglion1 00 of 4 0.20Down
Salivary gland3 00 of 4 0.42Down
Crop1 00 of 4 0.20Down
Midgut0 00 of 4 0.10Down
Tubule1 00 of 4 0.20Down
Hindgut0 00 of 4 0.10Down
Heart1 00 of 4 0.16Down
Fat body1 10 of 4 0.21Down
Ovary0 00 of 4 0.10Down
Testis145 114 of 416.80Up
Male accessory glands2 10 of 4 0.30Down
Virgin spermatheca1 00 of 4 0.22Down
Mated spermatheca1 00 of 4 0.14Down
Adult carcass2 00 of 4 0.30Down
Larval CNS1 00 of 4 0.21Down
Larval Salivary gland1 00 of 4 0.17Down
Larval midgut0 00 of 4 0.05Down
Larval tubule0 00 of 4 0.10Down
Larval hindgut0 00 of 4 0.10Down
Larval fat body10 61 of 4 1.20None
Larval trachea2 10 of 4 0.25Down
Larval carcass1 00 of 4 0.12Down
S2 cells (growing)1 00 of 4 0.19Down
Whole fly8 11 of 4

Looking for FBgn0051815. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime