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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051826 through 18771 annotations produced 1 hits



/// Ku80 (CG31826 /// Ku80):

Annotation Number : CG31826
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051826
Gbrowse : chr2L:15771262-15773119 (-) // 99.67 //
Probeset : 1625986_at
Accessions : protein= NP_723932;, nucleotide= NM_165131;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0004003 // ATP-dependent DNA helicase activity // infe
FlyMine data for FBgn0051826.
BioGrid reports that CG31826 interacts with CG5441 CG9426 .
VDRC has 3 RNAi stocks for FBgn0051826 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.10Down
Head18 24 of 4 0.90None
Eye2 10 of 4 0.14Down
Thoracicoabdominal ganglion4 10 of 4 0.20Down
Salivary gland28 53 of 4 1.43None
Crop19 04 of 4 1.00None
Midgut22 14 of 4 1.20None
Tubule34 24 of 4 1.80Up
Hindgut138 94 of 4 7.10Up
Heart19 24 of 4 1.01None
Fat body34 24 of 4 1.76Up
Ovary3 10 of 4 0.20Down
Testis180 74 of 4 9.20Up
Male accessory glands19 23 of 4 1.00None
Virgin spermatheca25 44 of 4 1.29None
Mated spermatheca32 24 of 4 1.66Up
Adult carcass36 44 of 4 1.90Up
Larval CNS2 11 of 4 0.13Down
Larval Salivary gland4 10 of 4 0.22Down
Larval midgut20 24 of 4 1.04None
Larval tubule4 00 of 4 0.20Down
Larval hindgut13 14 of 4 0.69Down
Larval fat body15 51 of 4 0.80None
Larval trachea55 114 of 4 2.84Up
Larval carcass16 24 of 4 0.87None
S2 cells (growing)0 00 of 4 0.04Down
Whole fly19 14 of 4

Looking for FBgn0051826. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime