Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051848 through 18771 annotations produced 1 hits



(CG31848):

Annotation Number : CG31848
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051848
Gbrowse : chr2L:13265080-13265665 (-) // 100.0 //
Probeset : 1623440_at
Accessions : protein= NP_723803;, nucleotide= NM_165036;
FlyMine data for FBgn0051848.
VDRC has 1 RNAi stocks for FBgn0051848 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.20None
Head0 00 of 4 0.10None
Eye1 00 of 4 0.15None
Thoracicoabdominal ganglion2 10 of 4 0.30None
Salivary gland4 20 of 4 0.56None
Crop0 00 of 4 0.10None
Midgut1 00 of 4 0.20None
Tubule2 00 of 4 0.30Down
Hindgut1 00 of 4 0.20None
Heart0 00 of 4 0.08None
Fat body1 10 of 4 0.21None
Ovary1 00 of 4 0.20None
Testis127 24 of 416.50Up
Male accessory glands2 10 of 4 0.30None
Virgin spermatheca1 00 of 4 0.19None
Mated spermatheca2 10 of 4 0.31None
Adult carcass2 00 of 4 0.30None
Larval CNS0 00 of 4 0.10None
Larval Salivary gland1 00 of 4 0.12None
Larval midgut2 00 of 4 0.28None
Larval tubule4 20 of 4 0.50None
Larval hindgut1 00 of 4 0.12None
Larval fat body23 72 of 4 3.10None
Larval trachea0 00 of 4 0.12None
Larval carcass1 00 of 4 0.15None
S2 cells (growing)2 10 of 4 0.38None
Whole fly7 20 of 4

Looking for FBgn0051848. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime