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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051851 through 18771 annotations produced 1 hits



(CG31851):

Annotation Number : CG31851
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051851
Gbrowse : chr2L:13257476-13258294 (+) // 100.0 //
Probeset : 1640349_at
Accessions : protein= NP_723798;, nucleotide= NM_165032;
Interpro : 0008080 // N-acetyltransferase activity // inferred from electronic annotation /// 0008415 // acyltransferase activity /
FlyMine data for FBgn0051851.
VDRC has 2 RNAi stocks for FBgn0051851 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.10Down
Head1 00 of 4 0.10Down
Eye3 10 of 4 0.16Down
Thoracicoabdominal ganglion0 00 of 4 0.00Down
Salivary gland7 20 of 4 0.39Down
Crop1 00 of 4 0.10Down
Midgut1 00 of 4 0.10Down
Tubule1 00 of 4 0.10Down
Hindgut1 00 of 4 0.10Down
Heart0 00 of 4 0.03Down
Fat body3 30 of 4 0.19Down
Ovary1 00 of 4 0.10Down
Testis133 84 of 4 7.20Up
Male accessory glands7 20 of 4 0.40Down
Virgin spermatheca5 10 of 4 0.29Down
Mated spermatheca3 10 of 4 0.19Down
Adult carcass6 40 of 4 0.30None
Larval CNS0 00 of 4 0.05Down
Larval Salivary gland2 00 of 4 0.11Down
Larval midgut0 00 of 4 0.04Down
Larval tubule1 00 of 4 0.10Down
Larval hindgut1 00 of 4 0.09Down
Larval fat body28 51 of 4 1.50None
Larval trachea2 30 of 4 0.16Down
Larval carcass2 10 of 4 0.15Down
S2 cells (growing)0 00 of 4 0.04Down
Whole fly18 13 of 4

Looking for FBgn0051851. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime