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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051855 through 18771 annotations produced 1 hits



(CG31855):

Annotation Number : CG31855
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051855
Gbrowse : chr2L:13369232-13369997 (+) // 100.0 //
Probeset : 1623147_at
Accessions : protein= NP_001137822; /// NP_723812;, nucleotide= NM_001144350; /// NM_165040;
FlyMine data for FBgn0051855.
TRiP has 1 RNAi stocks for FBgn0051855 available for purchase.
VDRC has 2 RNAi stocks for FBgn0051855 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain213 ± 44 of 4 1.20None
Head133 ± 104 of 4 0.70Down
Eye137 ± 84 of 4 0.75Down
Thoracicoabdominal ganglion150 ± 34 of 4 0.80Down
Salivary gland80 ± 54 of 4 0.44Down
Crop132 ± 34 of 4 0.70Down
Midgut150 ± 54 of 4 0.80Down
Tubule47 ± 14 of 4 0.30Down
Hindgut121 ± 24 of 4 0.70Down
Heart77 ± 74 of 4 0.42Down
Fat body81 ± 84 of 4 0.45Down
Ovary330 ± 74 of 4 1.80Up
Testis205 ± 74 of 4 1.10None
Male accessory glands176 ± 104 of 4 1.00None
Virgin spermatheca35 ± 14 of 4 0.19Down
Mated spermatheca32 ± 24 of 4 0.18Down
Adult carcass94 ± 54 of 4 0.50Down
Larval CNS352 ± 214 of 4 1.92Up
Larval Salivary gland153 ± 24 of 4 0.84Down
Larval midgut94 ± 24 of 4 0.51Down
Larval tubule168 ± 124 of 4 0.90None
Larval hindgut103 ± 54 of 4 0.57Down
Larval fat body153 ± 94 of 4 0.80None
Larval trachea148 ± 144 of 4 0.81Down
Larval carcass108 ± 34 of 4 0.59Down
S2 cells (growing)201 ± 34 of 4 1.10None
Whole fly183 ± 94 of 4

Looking for FBgn0051855. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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