Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051862 through 18771 annotations produced 1 hits



(CG31862):

Annotation Number : CG31862
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051862
Gbrowse : chr2L:12338869-12339418 (+) // 100.0 //
Probeset : 1639456_at
Accessions : protein= NP_723741;, nucleotide= NM_165006;
FlyMine data for FBgn0051862.
VDRC has 3 RNAi stocks for FBgn0051862 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 01 of 4 3.10None
Head3 ± 00 of 4 2.60None
Eye1 ± 00 of 4 1.32None
Thoracicoabdominal ganglion4 ± 11 of 4 3.00None
Salivary gland12 ± 41 of 4 8.24None
Crop5 ± 11 of 4 3.90None
Midgut1 ± 00 of 4 0.90None
Tubule2 ± 10 of 4 2.00None
Hindgut1 ± 00 of 4 0.90None
Heart2 ± 00 of 4 1.59None
Fat body5 ± 12 of 4 3.88Up
Ovary1 ± 00 of 4 1.20None
Testis2 ± 00 of 4 1.50None
Male accessory glands6 ± 22 of 4 4.10None
Virgin spermatheca12 ± 34 of 4 8.22None
Mated spermatheca10 ± 22 of 4 7.31Up
Adult carcass6 ± 31 of 4 4.70None
Larval CNS4 ± 03 of 4 2.85Up
Larval Salivary gland5 ± 12 of 4 3.88None
Larval midgut2 ± 00 of 4 1.66None
Larval tubule4 ± 01 of 4 3.00Up
Larval hindgut3 ± 01 of 4 2.51None
Larval fat body4 ± 10 of 4 2.90None
Larval trachea2 ± 20 of 4 1.53None
Larval carcass1 ± 00 of 4 1.05None
S2 cells (growing)4 ± 12 of 4 2.80None
Whole fly1 ± 00 of 4

Looking for FBgn0051862. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime