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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051865 through 18771 annotations produced 1 hits



CG31865 /// CG31866 (Ada1-1 /// Ada1-2):

Annotation Number : CG31866
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051865 /// FBgn0051866
Gbrowse : chr2L:11992905-11994049 (+) // 100.0 // /// chr2L:11996816-11997960 (+) // 99.72 //
Probeset : 1633491_s_at
Accessions : protein= NP_723703; /// NP_723707;, nucleotide= NM_164980; /// NM_164984;
Interpro : 0003677 // DNA binding // inferred from electronic annotation
FlyMine data for FBgn0051865 /// FBgn0051866.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain124 34 of 4 1.30Up
Head65 14 of 4 0.70Down
Eye87 34 of 4 0.94None
Thoracicoabdominal ganglion107 14 of 4 1.20Up
Salivary gland202 24 of 4 2.17Up
Crop105 44 of 4 1.10None
Midgut66 34 of 4 0.70Down
Tubule73 24 of 4 0.80Down
Hindgut92 24 of 4 1.00None
Heart75 54 of 4 0.82Down
Fat body53 44 of 4 0.57Down
Ovary183 54 of 4 2.00Up
Testis51 34 of 4 0.60Down
Male accessory glands76 24 of 4 0.80Down
Virgin spermatheca41 34 of 4 0.45Down
Mated spermatheca49 34 of 4 0.54Down
Adult carcass66 14 of 4 0.70Down
Larval CNS151 104 of 4 1.63Up
Larval Salivary gland102 54 of 4 1.10None
Larval midgut46 34 of 4 0.50Down
Larval tubule105 34 of 4 1.10Up
Larval hindgut72 24 of 4 0.78Down
Larval fat body76 34 of 4 0.80Down
Larval trachea118 44 of 4 1.27Up
Larval carcass88 94 of 4 0.96None
S2 cells (growing)113 24 of 4 1.22Up
Whole fly93 34 of 4

Looking for FBgn0051865. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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