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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0051897 through 18771 annotations produced 1 hits


Annotation Number : CG31897
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051897
Gbrowse : chr2L:8442642-8445660 (+) // 100.0 //
Probeset : 1632627_at
Accessions : protein= NP_723396;, nucleotide= NM_164821;
FlyMine data for FBgn0051897.
VDRC has 1 RNAi stocks for FBgn0051897 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 03 of 4 1.80None
Head1 00 of 4 0.30None
Eye2 00 of 4 0.57None
Thoracicoabdominal ganglion9 00 of 4 2.30Up
Salivary gland1 00 of 4 0.46None
Crop0 00 of 4 0.10None
Midgut0 00 of 4 0.10None
Tubule1 00 of 4 0.30Down
Hindgut0 00 of 4 0.20None
Heart2 00 of 4 0.49None
Fat body0 00 of 4 0.16None
Ovary2 00 of 4 0.60None
Testis32 14 of 4 7.90Up
Male accessory glands2 10 of 4 0.50None
Virgin spermatheca0 00 of 4 0.13None
Mated spermatheca0 00 of 4 0.13None
Adult carcass1 00 of 4 0.20None
Larval CNS1 00 of 4 0.31None
Larval Salivary gland0 00 of 4 0.14None
Larval midgut1 00 of 4 0.27None
Larval tubule0 00 of 4 0.20None
Larval hindgut0 00 of 4 0.06None
Larval fat body0 00 of 4 0.10None
Larval trachea1 10 of 4 0.27None
Larval carcass0 00 of 4 0.20None
S2 cells (growing)0 00 of 4 0.09None
Whole fly4 11 of 4

Looking for FBgn0051897. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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