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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051924 through 18771 annotations produced 1 hits



(CG31924):

Annotation Number : CG31924
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051924
Gbrowse : chr2L:1354097-1354919 (-) // 100.0 //
Probeset : 1628274_a_at
Accessions : protein= NP_608598; /// NP_722700; /// NP_722701;, nucleotide= NM_134754; /// NM_164413; /// NM_164414;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0008967 // phosphoglycolate phosphatase activit
FlyMine data for FBgn0051924.
VDRC has 3 RNAi stocks for FBgn0051924 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.10Down
Head2 ± 10 of 4 0.10Down
Eye1 ± 00 of 4 0.05Down
Thoracicoabdominal ganglion3 ± 00 of 4 0.10Down
Salivary gland10 ± 30 of 4 0.25Down
Crop6 ± 10 of 4 0.20Down
Midgut1 ± 00 of 4 0.00Down
Tubule4 ± 00 of 4 0.10Down
Hindgut4 ± 10 of 4 0.10Down
Heart3 ± 10 of 4 0.10Down
Fat body6 ± 30 of 4 0.17Down
Ovary2 ± 00 of 4 0.10Down
Testis437 ± 194 of 410.90Up
Male accessory glands3 ± 10 of 4 0.10Down
Virgin spermatheca5 ± 10 of 4 0.14Down
Mated spermatheca5 ± 10 of 4 0.13Down
Adult carcass1 ± 00 of 4 0.00Down
Larval CNS5 ± 20 of 4 0.15Down
Larval Salivary gland3 ± 10 of 4 0.08Down
Larval midgut4 ± 10 of 4 0.10Down
Larval tubule3 ± 00 of 4 0.10Down
Larval hindgut6 ± 00 of 4 0.17Down
Larval fat body38 ± 122 of 4 0.90None
Larval trachea3 ± 20 of 4 0.09Down
Larval carcass6 ± 20 of 4 0.16Down
S2 cells (growing)3 ± 20 of 4 0.10Down
Whole fly40 ± 54 of 4

Looking for FBgn0051924. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime