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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051926 through 18771 annotations produced 1 hits



aspartic-type endopeptidase (CG31926):

Annotation Number : CG31926
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051926
Gbrowse : chr2L:1495746-1496979 (+) // 100.0 //
Probeset : 1638332_at
Accessions : protein= NP_722706;, nucleotide= NM_164419;
Interpro : 0004190 // aspartic-type endopeptidase activity // inferred from electronic annotation /// 0004190 // aspartic-type endo
FlyMine data for FBgn0051926.
Homophila reports that CG31926 is a close match (1e-47) to human gene REN (NP_000528), a gene associated with Renal tubular dysgenesis, 267430 (3);[Hyperproreninemia] (3).
VDRC has 1 RNAi stocks for FBgn0051926 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.00None
Head5 ± 20 of 4 0.10None
Eye3 ± 10 of 4 0.03None
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland17 ± 20 of 4 0.18None
Crop3 ± 10 of 4 0.00None
Midgut9 ± 20 of 4 0.10None
Tubule3 ± 00 of 4 0.00Down
Hindgut3 ± 10 of 4 0.00None
Heart0 ± 00 of 4 0.01Down
Fat body2 ± 10 of 4 0.03Down
Ovary219 ± 214 of 4 2.30Up
Testis4 ± 00 of 4 0.00None
Male accessory glands5 ± 10 of 4 0.10None
Virgin spermatheca3 ± 10 of 4 0.03None
Mated spermatheca2 ± 00 of 4 0.03Down
Adult carcass7 ± 40 of 4 0.10None
Larval CNS2 ± 10 of 4 0.02Down
Larval Salivary gland2 ± 00 of 4 0.02Down
Larval midgut37 ± 34 of 4 0.39None
Larval tubule2 ± 10 of 4 0.00Down
Larval hindgut3 ± 10 of 4 0.04None
Larval fat body4 ± 20 of 4 0.00None
Larval trachea1 ± 00 of 4 0.01Down
Larval carcass2 ± 10 of 4 0.03Down
S2 cells (growing)0 ± 00 of 4 0.01Down
Whole fly95 ± 294 of 4

Looking for FBgn0051926. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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