FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051953 through 18771 annotations produced 2 hits

/// glaikit (CG31953 /// gkt):

Annotation Number : CG31953
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051953 /// FBgn0260817
Gbrowse : chr2L:3162514-3163147 (+) // 100.0 // /// chr2L:3161444-3162044 (+) // 94.79 // /// chrUextra:2343771-2344351 (-) // 91.63 //
Probeset : 1626850_s_at
Accessions : protein= NP_523465; /// NP_722881;, nucleotide= NM_078741; /// NM_164528;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural
Interpro : 0004518 // nuclease activity // inferred from electronic annotation /// 0004527 // exonuclease activity // inferred from
FlyMine data for FBgn0051953 /// FBgn0260817.
Homophila reports that CG31953 is a close match (2e-27) to human gene TDP1 (NP_060789), a gene associated with Spinocerebellar ataxia, autosomal recessive with axonal neuropathy, 607250 (3).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	151 ± 6	4 of 4	1.50	Up
Head	65 ± 4	4 of 4	0.70	Down
Eye	42 ± 3	4 of 4	0.43	Down
Thoracicoabdominal ganglion	198 ± 6	4 of 4	2.00	Up
Salivary gland	68 ± 10	4 of 4	0.70	None
Crop	45 ± 1	4 of 4	0.50	Down
Midgut	25 ± 2	2 of 4	0.30	Down
Tubule	48 ± 6	4 of 4	0.50	Down
Hindgut	39 ± 3	4 of 4	0.40	Down
Heart	29 ± 2	4 of 4	0.30	Down
Fat body	31 ± 6	4 of 4	0.32	Down
Ovary	218 ± 15	4 of 4	2.20	Up
Testis	95 ± 8	4 of 4	1.00	None
Male accessory glands	21 ± 3	2 of 4	0.20	Down
Virgin spermatheca	24 ± 2	4 of 4	0.25	Down
Mated spermatheca	28 ± 1	4 of 4	0.29	Down
Adult carcass	35 ± 4	4 of 4	0.40	Down
Larval CNS	158 ± 15	4 of 4	1.62	Up
Larval Salivary gland	83 ± 12	4 of 4	0.85	None
Larval midgut	30 ± 2	3 of 4	0.31	Down
Larval tubule	93 ± 0	4 of 4	1.00	None
Larval hindgut	63 ± 7	4 of 4	0.65	Down
Larval fat body	58 ± 0	4 of 4	0.60	Down
Larval trachea	42 ± 4	4 of 4	0.44	Down
Larval carcass	44 ± 1	4 of 4	0.46	Down
S2 cells (growing)	89 ± 0	4 of 4	0.92	None
Whole fly	98 ± 7	4 of 4

(CG31953):

Annotation Number : CG31953
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051953
Gbrowse : chr2L:3162514-3163147 (+) // 100.0 // /// chr2L:3161444-3162044 (+) // 94.79 // /// chrUextra:2343771-2344351 (-) // 91.63 //
Probeset : 1624274_at
Accessions : protein= NP_722881;, nucleotide= NM_164528;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0008081 // phosphoric diester hydrolase activity // inferred from electronic annotation /// 0017005 // 3'-tyrosyl-DNA ph
FlyMine data for FBgn0051953.
Homophila reports that CG31953 is a close match (2e-27) to human gene TDP1 (NP_060789), a gene associated with Spinocerebellar ataxia, autosomal recessive with axonal neuropathy, 607250 (3).
VDRC has 2 RNAi stocks for FBgn0051953 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	1.10	None
Head	2 ± 0	0 of 4	1.20	None
Eye	1 ± 0	0 of 4	0.81	None
Thoracicoabdominal ganglion	2 ± 0	0 of 4	1.30	None
Salivary gland	8 ± 2	0 of 4	4.78	None
Crop	3 ± 1	0 of 4	1.70	None
Midgut	8 ± 1	1 of 4	4.50	Up
Tubule	2 ± 0	0 of 4	1.30	None
Hindgut	2 ± 0	0 of 4	1.40	None
Heart	3 ± 1	0 of 4	2.12	None
Fat body	5 ± 3	1 of 4	3.08	None
Ovary	2 ± 0	1 of 4	1.40	None
Testis	3 ± 0	0 of 4	1.90	None
Male accessory glands	5 ± 2	0 of 4	2.80	None
Virgin spermatheca	3 ± 1	0 of 4	1.74	None
Mated spermatheca	4 ± 1	0 of 4	2.50	None
Adult carcass	7 ± 2	0 of 4	4.00	None
Larval CNS	1 ± 0	0 of 4	0.96	None
Larval Salivary gland	4 ± 1	0 of 4	2.34	None
Larval midgut	10 ± 1	0 of 4	5.73	Up
Larval tubule	4 ± 0	0 of 4	2.40	None
Larval hindgut	2 ± 0	0 of 4	1.31	None
Larval fat body	3 ± 1	0 of 4	2.10	None
Larval trachea	0 ± 0	0 of 4	0.27	None
Larval carcass	1 ± 0	0 of 4	0.77	None
S2 cells (growing)	5 ± 0	3 of 4	2.84	Up
Whole fly	1 ± 0	0 of 4

Looking for FBgn0051953. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720