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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051992 through 18771 annotations produced 1 hits



gawky (gw):

Annotation Number : CG31992
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051992
Gbrowse : chr4:670596-681222 (-) // 99.54 //
Probeset : 1625827_s_at
Accessions : protein= NP_001014691; /// NP_001014692; /// NP_726596; /// NP_726597; /// NP_726598; /// NP_726599; /// NP_726600; /// NP_726601;, nucleotide= NM_001014691; /// NM_001014692; /// NM_166780; /// NM_166781; /// NM_166782; /// NM_166783; /// NM_166784; /// NM_166785;
Pathway : nonsense-mediated decay // inferred from mutant phenotype /// 0001700 // embryonic development via the syncytial blasto
Interpro : 0000932 // cytoplasmic mRNA processing body // inferred from direct assay
FlyMine data for FBgn0051992.
TRiP has 1 RNAi stocks for FBgn0051992 available for purchase.
VDRC has 3 RNAi stocks for FBgn0051992 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1137 304 of 4 2.40Up
Head495 214 of 4 1.00None
Eye627 324 of 4 1.31Up
Thoracicoabdominal ganglion1134 274 of 4 2.40Up
Salivary gland795 124 of 4 1.66Up
Crop538 144 of 4 1.10None
Midgut427 94 of 4 0.90None
Tubule979 184 of 4 2.00Up
Hindgut540 224 of 4 1.10None
Heart524 84 of 4 1.10None
Fat body475 474 of 4 0.99None
Ovary961 94 of 4 2.00Up
Testis216 114 of 4 0.50Down
Male accessory glands582 164 of 4 1.20Up
Virgin spermatheca670 434 of 4 1.40Up
Mated spermatheca631 74 of 4 1.32Up
Adult carcass534 284 of 4 1.10None
Larval CNS1021 644 of 4 2.14Up
Larval Salivary gland825 144 of 4 1.73Up
Larval midgut506 204 of 4 1.06None
Larval tubule676 44 of 4 1.40Up
Larval hindgut682 284 of 4 1.43Up
Larval fat body666 354 of 4 1.40Up
Larval trachea818 154 of 4 1.71Up
Larval carcass793 314 of 4 1.66Up
S2 cells (growing)548 54 of 4 1.15Up
Whole fly478 214 of 4

Looking for FBgn0051992. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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