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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052022 through 18771 annotations produced 1 hits



(CG32022):

Annotation Number : CG32022
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052022
Gbrowse : chr3L:8713379-8714372 (-) // 100.0 //
Probeset : 1622921_at
Accessions : protein= NP_729403;, nucleotide= NM_168289;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
FlyMine data for FBgn0052022.
BDGP gene expression has embryonic in situ data for CG32022: 6 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0052022 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain228 ± 14 of 4 1.10None
Head135 ± 44 of 4 0.70Down
Eye153 ± 64 of 4 0.77Down
Thoracicoabdominal ganglion178 ± 94 of 4 0.90None
Salivary gland122 ± 94 of 4 0.61Down
Crop137 ± 64 of 4 0.70Down
Midgut76 ± 34 of 4 0.40Down
Tubule71 ± 24 of 4 0.40Down
Hindgut101 ± 34 of 4 0.50Down
Heart128 ± 34 of 4 0.64Down
Fat body110 ± 54 of 4 0.55Down
Ovary275 ± 34 of 4 1.40Up
Testis641 ± 284 of 4 3.20Up
Male accessory glands223 ± 124 of 4 1.10None
Virgin spermatheca123 ± 24 of 4 0.61Down
Mated spermatheca139 ± 144 of 4 0.70Down
Adult carcass92 ± 84 of 4 0.50Down
Larval CNS196 ± 124 of 4 0.98None
Larval Salivary gland174 ± 104 of 4 0.87None
Larval midgut88 ± 44 of 4 0.44Down
Larval tubule96 ± 34 of 4 0.50Down
Larval hindgut118 ± 74 of 4 0.59Down
Larval fat body172 ± 214 of 4 0.90None
Larval trachea180 ± 134 of 4 0.90None
Larval carcass114 ± 34 of 4 0.57Down
S2 cells (growing)528 ± 104 of 4 2.64Up
Whole fly200 ± 104 of 4

Looking for FBgn0052022. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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