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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052024 through 18771 annotations produced 1 hits



(CG32024):

Annotation Number : CG32024
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052024
Gbrowse : chr3L:8800724-8801231 (+) // 100.0 //
Probeset : 1633197_at
Accessions : protein= NP_729417;, nucleotide= NM_168296;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0008061 // chitin binding // inferred from electronic annotation
FlyMine data for FBgn0052024.
VDRC has 3 RNAi stocks for FBgn0052024 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 10 of 4 0.10Down
Head1 00 of 4 0.00Down
Eye1 00 of 4 0.02Down
Thoracicoabdominal ganglion1 00 of 4 0.00Down
Salivary gland9 30 of 4 0.14Down
Crop2 10 of 4 0.00Down
Midgut5 20 of 4 0.10Down
Tubule2491 754 of 437.00Up
Hindgut72 104 of 4 1.10None
Heart9 22 of 4 0.14Down
Fat body7 40 of 4 0.11Down
Ovary1 00 of 4 0.00Down
Testis1 00 of 4 0.00Down
Male accessory glands6 20 of 4 0.10Down
Virgin spermatheca4 20 of 4 0.06Down
Mated spermatheca3 10 of 4 0.05Down
Adult carcass6 20 of 4 0.10Down
Larval CNS1 20 of 4 0.02Down
Larval Salivary gland2 00 of 4 0.04Down
Larval midgut3 20 of 4 0.06Down
Larval tubule3 00 of 4 0.10Down
Larval hindgut3 10 of 4 0.04Down
Larval fat body4 21 of 4 0.10Down
Larval trachea0 00 of 4 0.00Down
Larval carcass3 00 of 4 0.06Down
S2 cells (growing)1 00 of 4 0.02Down
Whole fly67 154 of 4

Looking for FBgn0052024. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime