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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052071 through 18771 annotations produced 1 hits



(CG32071):

Annotation Number : CG32071
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052071
Gbrowse : chr3L:11096520-11096973 (-) // 100.0 //
Probeset : 1639150_at
Accessions : protein= NP_729667;, nucleotide= NM_168441;
FlyMine data for FBgn0052071.
VDRC has 1 RNAi stocks for FBgn0052071 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 10 of 4 0.70None
Head13 ± 10 of 4 1.70None
Eye9 ± 30 of 4 1.21None
Thoracicoabdominal ganglion12 ± 30 of 4 1.70None
Salivary gland27 ± 60 of 4 3.54Up
Crop15 ± 20 of 4 2.00Up
Midgut10 ± 20 of 4 1.30None
Tubule8 ± 10 of 4 1.10None
Hindgut10 ± 40 of 4 1.40None
Heart12 ± 20 of 4 1.67None
Fat body24 ± 70 of 4 3.24Up
Ovary2 ± 00 of 4 0.30Down
Testis3 ± 10 of 4 0.40None
Male accessory glands16 ± 40 of 4 2.20None
Virgin spermatheca15 ± 40 of 4 2.01None
Mated spermatheca15 ± 20 of 4 2.08Up
Adult carcass17 ± 50 of 4 2.30None
Larval CNS5 ± 30 of 4 0.68None
Larval Salivary gland962 ± 3384 of 4125.75None
Larval midgut18 ± 20 of 4 2.38Up
Larval tubule8 ± 30 of 4 1.10None
Larval hindgut11 ± 30 of 4 1.52None
Larval fat body18 ± 60 of 4 2.50None
Larval trachea8 ± 40 of 4 1.12None
Larval carcass19 ± 00 of 4 2.49Up
S2 cells (growing)5 ± 10 of 4 0.78None
Whole fly7 ± 10 of 4

Looking for FBgn0052071. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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