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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052073 through 18771 annotations produced 1 hits



(CG32073):

Annotation Number : CG32073
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052073
Gbrowse : chr3L:11100127-11100457 (-) // 100.0 //
Probeset : 1631145_at
Accessions : protein= NP_729668;, nucleotide= NM_168442;
FlyMine data for FBgn0052073.
VDRC has 1 RNAi stocks for FBgn0052073 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 11 of 4 0.30Down
Head8 ± 10 of 4 0.30Down
Eye6 ± 10 of 4 0.25Down
Thoracicoabdominal ganglion8 ± 10 of 4 0.30Down
Salivary gland27 ± 72 of 4 0.99None
Crop13 ± 20 of 4 0.50Down
Midgut11 ± 50 of 4 0.40Down
Tubule4 ± 10 of 4 0.20Down
Hindgut13 ± 20 of 4 0.50Down
Heart10 ± 11 of 4 0.38Down
Fat body24 ± 21 of 4 0.86None
Ovary6 ± 10 of 4 0.20Down
Testis140 ± 34 of 4 5.00Up
Male accessory glands15 ± 00 of 4 0.60Down
Virgin spermatheca8 ± 20 of 4 0.31Down
Mated spermatheca12 ± 10 of 4 0.46Down
Adult carcass18 ± 01 of 4 0.70Down
Larval CNS12 ± 22 of 4 0.45Down
Larval Salivary gland3295 ± 5444 of 4117.69Up
Larval midgut12 ± 30 of 4 0.46Down
Larval tubule7 ± 30 of 4 0.30Down
Larval hindgut30 ± 73 of 4 1.07None
Larval fat body24 ± 72 of 4 0.90None
Larval trachea12 ± 12 of 4 0.46Down
Larval carcass12 ± 30 of 4 0.44Down
S2 cells (growing)12 ± 10 of 4 0.45Down
Whole fly28 ± 22 of 4

Looking for FBgn0052073. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime