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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0052075 through 18771 annotations produced 1 hits


Annotation Number : CG32075
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052075
Gbrowse : chr3L:11055820-11058037 (-) // 100.0 //
Probeset : 1622895_at
Accessions : protein= NP_648428;, nucleotide= NM_140171;
FlyMine data for FBgn0052075.
BioGrid reports that CG32075 interacts with CG9868 .
VDRC has 3 RNAi stocks for FBgn0052075 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain78 34 of 4 0.70Down
Head61 24 of 4 0.50Down
Eye56 24 of 4 0.49Down
Thoracicoabdominal ganglion83 34 of 4 0.70Down
Salivary gland79 74 of 4 0.68Down
Crop69 54 of 4 0.60Down
Midgut64 44 of 4 0.60Down
Tubule73 103 of 4 0.60Down
Hindgut50 44 of 4 0.40Down
Heart55 44 of 4 0.48Down
Fat body92 114 of 4 0.79Down
Ovary227 34 of 4 2.00Up
Testis40 14 of 4 0.30Down
Male accessory glands141 84 of 4 1.20Up
Virgin spermatheca77 14 of 4 0.67Down
Mated spermatheca102 64 of 4 0.88None
Adult carcass58 24 of 4 0.50Down
Larval CNS160 54 of 4 1.38Up
Larval Salivary gland131 14 of 4 1.13Up
Larval midgut49 44 of 4 0.43Down
Larval tubule59 34 of 4 0.50Down
Larval hindgut62 04 of 4 0.54Down
Larval fat body60 24 of 4 0.50Down
Larval trachea113 124 of 4 0.98None
Larval carcass87 114 of 4 0.76None
S2 cells (growing)142 64 of 4 1.22Up
Whole fly116 24 of 4

Looking for FBgn0052075. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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