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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052076 through 18771 annotations produced 1 hits



Alpha 3 glucosyltransferase (Alg10):

Annotation Number : CG32076
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052076
Gbrowse : chr3L:11158074-11159720 (+) // 100.0 //
Probeset : 1636806_at
Accessions : protein= NP_729680;, nucleotide= NM_168449;
Pathway : 0005783 // endoplasmic reticulum // non-traceable author statement /// 0016021 // integral to membrane // inferred from
Interpro : "0004576 // oligosaccharyl transferase activity // non-traceable author statement /// 0016740 // transferase activity //
FlyMine data for FBgn0052076.
BDGP gene expression has embryonic in situ data for Alg10: 4 pix of staining in 1 body parts.
Homophila reports that CG32076 is a close match (8e-44) to human gene ALG10;KCR1 (NP_116223), a gene associated with {Acquired long QT syndrome, reduced susceptibility to}, 152427 (3).
TRiP has 1 RNAi stocks for FBgn0052076 available for purchase.
VDRC has 1 RNAi stocks for FBgn0052076 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain87 44 of 4 0.70Down
Head92 54 of 4 0.80Down
Eye107 34 of 4 0.88None
Thoracicoabdominal ganglion98 24 of 4 0.80Down
Salivary gland193 134 of 4 1.58Up
Crop93 74 of 4 0.80Down
Midgut114 24 of 4 0.90None
Tubule196 44 of 4 1.60Up
Hindgut91 34 of 4 0.70Down
Heart109 34 of 4 0.89None
Fat body117 204 of 4 0.96None
Ovary200 74 of 4 1.60Up
Testis147 34 of 4 1.20Up
Male accessory glands228 124 of 4 1.90Up
Virgin spermatheca164 54 of 4 1.34Up
Mated spermatheca187 54 of 4 1.54Up
Adult carcass97 44 of 4 0.80Down
Larval CNS199 114 of 4 1.63Up
Larval Salivary gland216 224 of 4 1.77Up
Larval midgut95 64 of 4 0.78Down
Larval tubule119 44 of 4 1.00None
Larval hindgut98 74 of 4 0.80None
Larval fat body134 54 of 4 1.10None
Larval trachea195 154 of 4 1.60Up
Larval carcass96 44 of 4 0.79Down
S2 cells (growing)297 144 of 4 2.43Up
Whole fly122 64 of 4

Looking for FBgn0052076. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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