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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052095 through 18771 annotations produced 1 hits



(CG32095):

Annotation Number : CG32095
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052095
Gbrowse : chr3L:11817309-11818773 (-) // 100.0 //
Probeset : 1635301_at
Accessions : protein= NP_729755;, nucleotide= NM_168482;
FlyMine data for FBgn0052095.
BDGP gene expression has embryonic in situ data for CG32095: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0052095 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain111 14 of 4 1.10None
Head56 14 of 4 0.50Down
Eye62 44 of 4 0.60Down
Thoracicoabdominal ganglion102 74 of 4 1.00None
Salivary gland74 24 of 4 0.71Down
Crop47 34 of 4 0.50Down
Midgut34 14 of 4 0.30Down
Tubule30 14 of 4 0.30Down
Hindgut39 24 of 4 0.40Down
Heart27 24 of 4 0.26Down
Fat body29 24 of 4 0.28Down
Ovary232 84 of 4 2.20Up
Testis33 14 of 4 0.30Down
Male accessory glands98 14 of 4 0.90None
Virgin spermatheca44 34 of 4 0.42Down
Mated spermatheca48 44 of 4 0.46Down
Adult carcass36 44 of 4 0.40Down
Larval CNS134 104 of 4 1.29Up
Larval Salivary gland60 14 of 4 0.58Down
Larval midgut28 24 of 4 0.27Down
Larval tubule33 14 of 4 0.30Down
Larval hindgut40 34 of 4 0.39Down
Larval fat body46 74 of 4 0.40Down
Larval trachea68 54 of 4 0.66Down
Larval carcass44 24 of 4 0.43Down
S2 cells (growing)73 24 of 4 0.70Down
Whole fly104 44 of 4

Looking for FBgn0052095. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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