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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052099 through 18771 annotations produced 1 hits



Ebony Activating Protein (eap):

Annotation Number : CG32099
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052099
Gbrowse : chr3L:12142372-12143433 (+) // 100.0 //
Probeset : 1633677_at
Accessions : protein= NP_729788;, nucleotide= NM_168492;
Interpro : 0000287 // magnesium ion binding // inferred from electronic annotation /// 0008897 // holo-[acyl-carrier-protein] synth
FlyMine data for FBgn0052099.
BDGP gene expression has embryonic in situ data for CG32099: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0052099 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain52 ± 34 of 4 1.30Up
Head47 ± 24 of 4 1.20None
Eye95 ± 54 of 4 2.36Up
Thoracicoabdominal ganglion45 ± 24 of 4 1.10None
Salivary gland66 ± 54 of 4 1.64Up
Crop37 ± 44 of 4 0.90None
Midgut55 ± 24 of 4 1.40Up
Tubule143 ± 24 of 4 3.50Up
Hindgut55 ± 04 of 4 1.40Up
Heart68 ± 34 of 4 1.68Up
Fat body70 ± 114 of 4 1.73Up
Ovary52 ± 34 of 4 1.30Up
Testis33 ± 44 of 4 0.80None
Male accessory glands53 ± 34 of 4 1.30Up
Virgin spermatheca81 ± 34 of 4 2.02Up
Mated spermatheca68 ± 64 of 4 1.69Up
Adult carcass41 ± 44 of 4 1.00None
Larval CNS44 ± 54 of 4 1.11None
Larval Salivary gland113 ± 34 of 4 2.79Up
Larval midgut53 ± 74 of 4 1.31None
Larval tubule185 ± 84 of 4 4.60Up
Larval hindgut78 ± 34 of 4 1.92Up
Larval fat body97 ± 124 of 4 2.40Up
Larval trachea77 ± 104 of 4 1.92Up
Larval carcass68 ± 44 of 4 1.70Up
S2 cells (growing)51 ± 04 of 4 1.27Up
Whole fly40 ± 24 of 4

Looking for FBgn0052099. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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