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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052107 through 18771 annotations produced 1 hits



(CG32107):

Annotation Number : CG32107
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052107
Gbrowse : chr3L:12851445-12853839 (-) // 100.0 //
Probeset : 1627408_at
Accessions : protein= NP_729846;, nucleotide= NM_168526;
FlyMine data for FBgn0052107.
VDRC has 3 RNAi stocks for FBgn0052107 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head3 ± 00 of 4 0.20Down
Eye4 ± 12 of 4 0.24Down
Thoracicoabdominal ganglion2 ± 00 of 4 0.10Down
Salivary gland9 ± 20 of 4 0.51None
Crop4 ± 10 of 4 0.20Down
Midgut174 ± 104 of 4 9.50Up
Tubule272 ± 494 of 414.80Up
Hindgut62 ± 04 of 4 3.40Up
Heart2 ± 00 of 4 0.15Down
Fat body6 ± 21 of 4 0.38Down
Ovary1 ± 00 of 4 0.10Down
Testis2 ± 00 of 4 0.10Down
Male accessory glands5 ± 10 of 4 0.30Down
Virgin spermatheca1 ± 00 of 4 0.09Down
Mated spermatheca5 ± 10 of 4 0.29Down
Adult carcass5 ± 20 of 4 0.30Down
Larval CNS4 ± 10 of 4 0.22Down
Larval Salivary gland4 ± 20 of 4 0.24Down
Larval midgut102 ± 34 of 4 5.56Up
Larval tubule68 ± 104 of 4 3.70Up
Larval hindgut104 ± 64 of 4 5.66Up
Larval fat body2 ± 10 of 4 0.20Down
Larval trachea2 ± 10 of 4 0.14Down
Larval carcass3 ± 00 of 4 0.19Down
S2 cells (growing)1 ± 00 of 4 0.07Down
Whole fly18 ± 33 of 4

Looking for FBgn0052107. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime