FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052111 through 18771 annotations produced 1 hits

(CG32111):

Annotation Number : CG32111
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052111
Gbrowse : chr3L:12621035-12641380 (+) // 100.0 //
Probeset : 1640909_at
Accessions : protein= NP_729817;, nucleotide= NM_168504;
FlyMine data for FBgn0052111.
BDGP gene expression has embryonic in situ data for CG32111: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0052111 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.30	None
Head	2 ± 0	0 of 4	0.90	None
Eye	1 ± 0	0 of 4	0.62	None
Thoracicoabdominal ganglion	5 ± 0	0 of 4	2.50	Up
Salivary gland	7 ± 2	0 of 4	3.28	None
Crop	4 ± 2	1 of 4	2.10	None
Midgut	2 ± 0	0 of 4	1.00	None
Tubule	5 ± 1	0 of 4	2.20	Up
Hindgut	3 ± 1	0 of 4	1.50	None
Heart	2 ± 0	0 of 4	1.03	None
Fat body	5 ± 2	0 of 4	2.13	None
Ovary	3 ± 0	0 of 4	1.50	None
Testis	2 ± 1	1 of 4	1.10	None
Male accessory glands	4 ± 1	0 of 4	2.00	None
Virgin spermatheca	3 ± 0	0 of 4	1.49	None
Mated spermatheca	3 ± 1	0 of 4	1.45	None
Adult carcass	7 ± 2	0 of 4	3.20	None
Larval CNS	5 ± 2	0 of 4	2.24	None
Larval Salivary gland	9 ± 1	0 of 4	3.88	Up
Larval midgut	1 ± 0	0 of 4	0.60	None
Larval tubule	2 ± 0	0 of 4	1.20	None
Larval hindgut	3 ± 0	0 of 4	1.68	None
Larval fat body	8 ± 1	0 of 4	3.60	Up
Larval trachea	1 ± 1	0 of 4	0.76	None
Larval carcass	7 ± 0	0 of 4	3.15	Up
S2 cells (growing)	2 ± 0	0 of 4	1.11	None
Whole fly	2 ± 0	0 of 4

Looking for FBgn0052111. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720